Dataset Open Access

Read-mapping for next-generation sequencing data (Drosophila melanogaster)

Gilks, William

Code, logs and quality-control data for whole-genome resequencing of Sussex-LHM and RG Drosophila melanogaster.

Mapping code is in the archive lhm_mapping_scripts.zip

Mapping logs are in the in the archive lhm_mapping_logs.zip

Other zip archives contain the quality control data.

The pre-print manuscript for this data is available on biorxiv: "Whole genome resequencing of a laboratory-adapted Drosophila melanogaster population sample" http://biorxiv.org/content/early/2016/10/17/081554 doi: http://dx.doi.org/10.1101/081554

Files (305.1 MB)
Name Size
aligment_summary_metrics.zip
md5:6a641881a474acb252654510d46efc49
205.6 kB Download
baseCovDistr.zip
md5:7c2db114a700f47d06325f7c3f191a4c
935.4 kB Download
callable_loci.zip
md5:1ca2b860dff173f637c0f5803fd1c514
74.5 kB Download
dup_counts.zip
md5:9f68814018c0d8fecca799bc446237ae
346.9 kB Download
error_rates.zip
md5:04a729576d1f2d54dd1085ae98992867
386.8 kB Download
insert_sizes.zip
md5:b834270a3d01f8410fddcfafa687d249
1.2 MB Download
lhm_mapping_logs.zip
md5:d1bf73c825c2a1a954d4c8154bae4be6
7.3 MB Download
lhm_mapping_scripts.zip
md5:2d5e0db14b46ce1f89bf040f098db8b6
441.5 kB Download
qualDistrMetrics.zip
md5:3018e90b0b8b3f4eb098969ab4062fd2
212.3 kB Download
quality_by_cycle.zip
md5:ee229a7db77716b26b27efb206652bb8
450.9 kB Download
readLengthDistr.zip
md5:e2be3e04b14d3393fd1c7c8d6b204b4d
178.8 kB Download
realignment_intervals.zip
md5:15aece5e4cae358a890f60ba8448bac1
293.4 MB Download
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