debinfer-v0.4.1.zip
pboesu-debinfer-fd1e1fc
.Rbuildignore
168 Bytes
.gitignore
66 Bytes
.travis.yml
1.1 kB
DEBinfer.Rproj
537 Bytes
DESCRIPTION
1.5 kB
NAMESPACE
991 Bytes
R
data_doc.R
1.0 kB
de_mcmc_rev.R
17.2 kB
de_solver.R
4.7 kB
debinfer_utils.R
1.9 kB
mcmc_plotting.R
8.1 kB
setup_mcmc.R
5.4 kB
README.md
2.2 kB
codecov.yml
55 Bytes
cran-comments.md
929 Bytes
data
chytrid.rda
286 Bytes
logistic.rda
1.0 kB
data-raw
coldinwarm.csv
461 Bytes
create_chytrid_data.R
111 Bytes
create_logistic_data.R
935 Bytes
docs
chytrid.html
2.6 kB
css
bootstrap-responsive.css
14.4 kB
bootstrap-responsive.min.css
10.6 kB
bootstrap.css
99.9 kB
bootstrap.min.css
83.0 kB
highlight.css
633 Bytes
staticdocs.css
396 Bytes
de_mcmc.html
5.8 kB
debinfer_par.html
4.9 kB
deinits.html
2.3 kB
depars.html
2.3 kB
img
glyphicons-halflings-white.png
8.8 kB
glyphicons-halflings.png
13.8 kB
index.html
4.7 kB
is.debinfer_result.html
2.2 kB
js
bootstrap.js
50.1 kB
bootstrap.min.js
22.3 kB
log_post_params.html
3.1 kB
log_prior_params.html
2.6 kB
logd_prior.html
2.8 kB
logistic.html
2.4 kB
pairs.debinfer_result.html
3.4 kB
plot.debinfer_result.html
3.1 kB
plot.post_sim_list.html
4.4 kB
post_prior_densplot.html
3.5 kB
post_sim.html
6.9 kB
prior_draw_rev.html
2.8 kB
propose_joint_rev.html
2.6 kB
propose_single_rev.html
2.5 kB
reference.html
4.6 kB
reshape_post_sim.html
2.4 kB
setup_debinfer.html
2.5 kB
solve_de.html
7.7 kB
summary.debinfer_result.html
2.6 kB
update_sample_rev.html
4.9 kB
vignettes
chytrid_dede_example.pdf
638.3 kB
deBInfer_compiled_code.pdf
429.4 kB
logistic_ode_example.pdf
1.2 MB
inst
CITATION
897 Bytes
man
chytrid.Rd
681 Bytes
de_mcmc.Rd
2.0 kB
debinfer_par.Rd
2.1 kB
deinits.Rd
338 Bytes
depars.Rd
327 Bytes
is.debinfer_result.Rd
286 Bytes
log_post_params.Rd
667 Bytes
log_prior_params.Rd
484 Bytes
logd_prior.Rd
692 Bytes
logistic.Rd
508 Bytes
pairs.debinfer_result.Rd
774 Bytes
plot.debinfer_result.Rd
669 Bytes
plot.post_sim_list.Rd
1.1 kB
post_prior_densplot.Rd
937 Bytes
post_sim.Rd
899 Bytes
prior_draw_rev.Rd
517 Bytes
propose_joint_rev.Rd
491 Bytes
propose_single_rev.Rd
407 Bytes
reshape_post_sim.Rd
444 Bytes
setup_debinfer.Rd
553 Bytes
solve_de.Rd
1.2 kB
summary.debinfer_result.Rd
452 Bytes
update_sample_rev.Rd
1.4 kB
sandbox
CSZ_benchmark_solvealways.png
9.6 kB
TODO.txt
1.1 kB
benchmarking_utils.R
756 Bytes
benchmarks-always-solve.RDS
17.8 kB
benchmarks-dont-solve-obs-dde.RDS
17.9 kB
benchmarks-dont-solve-obs.RDS
10.7 kB
chytrid_dede_example.R
4.9 kB
conversion_notes.Rmd
1.9 kB
conversion_notes.html
645.7 kB
dde_mcmc_rev_sandbox.R
7.5 kB
dde_solver_sandbox.R
2.0 kB
demo
DEB_daphnia.r
3.9 kB
deb_post_prior_daph.R
2.9 kB
run_mcmc_daphnia.R
1.4 kB
joint-proposals-sandbox.R
818 Bytes
legacy
de_mcmc_legacy.R
20.7 kB
plotting_legacy.R
631 Bytes
setup_mcmc_legacy.R
5.6 kB
solver_utils_legacy.R
3.4 kB
mcmc_rev_sandbox.R
5.8 kB
moment_matching.R
348 Bytes
ode_solver_sandbox.R
1.3 kB
parlist_remapping.R
4.6 kB
post_prior_densplot.png
41.2 kB
prior_evaluation_test.R
1.3 kB
travis-gfortran-question.md
1.0 kB
walb_deb_obs_model.R
819 Bytes
tests
testthat
test_debinfer_par.R
323 Bytes
test_inference_logistic.R
6.4 kB
test_likelihood_eval.R
821 Bytes
testthat.R
60 Bytes
vignettes
chytrid_dede_example.R
7.2 kB
chytrid_dede_example.Rmd
14.1 kB
chytrid_dede_example.pdf
826.5 kB
deBInfer_compiled_code.pdf
472.2 kB
deBInfer_compiled_code.pdf.asis
128 Bytes
deBInfer_compiled_code.pdf.bak
472.2 kB
debinfer.bib
14.4 kB
epsilon-sensitivity.pdf
81.9 kB
logistic_ode_example.R
7.5 kB
logistic_ode_example.Rmd
14.2 kB
logistic_ode_example.pdf
628.4 kB
methods-in-ecology-and-evolution.csl
7.0 kB