Journal article Open Access

TXMS: Rapid determination of quaternary protein structures in complex biological samples

Hamed Khakzad; Simon Hauri; Lotta Happonen; Johan Teleman; Johan Malmström; Lars Malmström


JSON Export

{
  "files": [
    {
      "links": {
        "self": "https://zenodo.org/api/files/7469bf9b-ffd7-4dda-b9fd-18a8c331aaed/Container.zip"
      }, 
      "checksum": "md5:c33fdab306b0b26bfea6b09d7e647c6d", 
      "bucket": "7469bf9b-ffd7-4dda-b9fd-18a8c331aaed", 
      "key": "Container.zip", 
      "type": "zip", 
      "size": 1240480898
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/7469bf9b-ffd7-4dda-b9fd-18a8c331aaed/Global_docking_models.zip"
      }, 
      "checksum": "md5:2a3956573b2ef8523ee9ebeea61d6691", 
      "bucket": "7469bf9b-ffd7-4dda-b9fd-18a8c331aaed", 
      "key": "Global_docking_models.zip", 
      "type": "zip", 
      "size": 36632181617
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/7469bf9b-ffd7-4dda-b9fd-18a8c331aaed/Local_docking_models.zip"
      }, 
      "checksum": "md5:7887bc5ff882855346edaf6d9a914504", 
      "bucket": "7469bf9b-ffd7-4dda-b9fd-18a8c331aaed", 
      "key": "Local_docking_models.zip", 
      "type": "zip", 
      "size": 3160426945
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/7469bf9b-ffd7-4dda-b9fd-18a8c331aaed/PDB_files.zip"
      }, 
      "checksum": "md5:e9a4fa0c2663f828cb5286da5ccc0bda", 
      "bucket": "7469bf9b-ffd7-4dda-b9fd-18a8c331aaed", 
      "key": "PDB_files.zip", 
      "type": "zip", 
      "size": 2385816
    }, 
    {
      "links": {
        "self": "https://zenodo.org/api/files/7469bf9b-ffd7-4dda-b9fd-18a8c331aaed/PyMOL_sessions.zip"
      }, 
      "checksum": "md5:d990be4693c29b6a9e0e10531b8af726", 
      "bucket": "7469bf9b-ffd7-4dda-b9fd-18a8c331aaed", 
      "key": "PyMOL_sessions.zip", 
      "type": "zip", 
      "size": 14104692
    }
  ], 
  "owners": [
    43233
  ], 
  "doi": "10.5281/zenodo.1438111", 
  "stats": {
    "version_unique_downloads": 41.0, 
    "unique_views": 633.0, 
    "views": 669.0, 
    "version_views": 669.0, 
    "unique_downloads": 41.0, 
    "version_unique_views": 633.0, 
    "volume": 686252449510.0, 
    "version_downloads": 75.0, 
    "downloads": 75.0, 
    "version_volume": 686252449510.0
  }, 
  "links": {
    "doi": "https://doi.org/10.5281/zenodo.1438111", 
    "conceptdoi": "https://doi.org/10.5281/zenodo.1438110", 
    "bucket": "https://zenodo.org/api/files/7469bf9b-ffd7-4dda-b9fd-18a8c331aaed", 
    "conceptbadge": "https://zenodo.org/badge/doi/10.5281/zenodo.1438110.svg", 
    "html": "https://zenodo.org/record/1438111", 
    "latest_html": "https://zenodo.org/record/1438111", 
    "badge": "https://zenodo.org/badge/doi/10.5281/zenodo.1438111.svg", 
    "latest": "https://zenodo.org/api/records/1438111"
  }, 
  "conceptdoi": "10.5281/zenodo.1438110", 
  "created": "2018-09-28T10:48:31.982795+00:00", 
  "updated": "2020-01-20T17:34:29.414553+00:00", 
  "conceptrecid": "1438110", 
  "revision": 6, 
  "id": 1438111, 
  "metadata": {
    "access_right_category": "success", 
    "doi": "10.5281/zenodo.1438111", 
    "description": "<p>We provided the following data here:</p>\n\n<ul>\n\t<li>Software as&nbsp;a singularity container</li>\n\t<li>Modeling data (both low resolution and high resolution docking models)</li>\n\t<li>PyMOL sessions and PDB files.</li>\n</ul>\n\n<p>Reference:</p>\n\n<p>Hauri-Khakzad et al.,&nbsp;Rapid determination of quaternary protein structures in complex biological samples, Nature Communications</p>", 
    "license": {
      "id": "CC-BY-4.0"
    }, 
    "title": "TXMS: Rapid determination of quaternary protein structures in complex biological samples", 
    "journal": {
      "title": "Nature Communications"
    }, 
    "relations": {
      "version": [
        {
          "count": 1, 
          "index": 0, 
          "parent": {
            "pid_type": "recid", 
            "pid_value": "1438110"
          }, 
          "is_last": true, 
          "last_child": {
            "pid_type": "recid", 
            "pid_value": "1438111"
          }
        }
      ]
    }, 
    "access_right": "open", 
    "references": [], 
    "keywords": [
      "TXMS"
    ], 
    "publication_date": "2019-01-01", 
    "creators": [
      {
        "affiliation": "Institute of Computational Science, University of Zurich, Zurich, Switzerland", 
        "name": "Hamed Khakzad"
      }, 
      {
        "affiliation": "Lund University, Faculty of Medicine, Department of Clinical Sciences Lund, Division of Infection Medicine, Lund, Sweden", 
        "name": "Simon Hauri"
      }, 
      {
        "affiliation": "Lund University, Faculty of Medicine, Department of Clinical Sciences Lund, Division of Infection Medicine, Lund, Sweden", 
        "name": "Lotta Happonen"
      }, 
      {
        "affiliation": "Lund University, Faculty of Medicine, Department of Clinical Sciences Lund, Division of Infection Medicine, Lund, Sweden", 
        "name": "Johan Teleman"
      }, 
      {
        "affiliation": "Lund University, Faculty of Medicine, Department of Clinical Sciences Lund, Division of Infection Medicine, Lund, Sweden", 
        "name": "Johan Malmstr\u00f6m"
      }, 
      {
        "affiliation": "Institute of Computational Science, University of Zurich, Zurich, Switzerland", 
        "name": "Lars Malmstr\u00f6m"
      }
    ], 
    "notes": "This work was supported by Foundation of Knut and Alice Wallenberg (2016.0023), European research council starting grant (ERC-2012-StG-309831), the Swedish Research Council (project 2015-\n 02481), the Swedish Research Council (project 2015-02481), the Wallenberg Academy Fellow program KAW (2012.0178 and 2017.0271), Olle Engkvist Byggm\u00e4stare and the Medical Faculty of Lund University to JM; the Swiss National Science Foundation (grant no. SNF 200021 160188) to LM.", 
    "resource_type": {
      "subtype": "article", 
      "type": "publication", 
      "title": "Journal article"
    }, 
    "related_identifiers": [
      {
        "scheme": "doi", 
        "identifier": "10.5281/zenodo.1438110", 
        "relation": "isVersionOf"
      }
    ]
  }
}
669
75
views
downloads
All versions This version
Views 669669
Downloads 7575
Data volume 686.3 GB686.3 GB
Unique views 633633
Unique downloads 4141

Share

Cite as