Dataset Open Access
Mehmet Tekman
<?xml version='1.0' encoding='utf-8'?> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#"> <rdf:Description rdf:about="https://doi.org/10.5281/zenodo.1345635"> <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/> <dct:type rdf:resource="http://purl.org/dc/dcmitype/Dataset"/> <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://doi.org/10.5281/zenodo.1345635</dct:identifier> <foaf:page rdf:resource="https://doi.org/10.5281/zenodo.1345635"/> <dct:creator> <rdf:Description> <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/> <foaf:name>Mehmet Tekman</foaf:name> <org:memberOf> <foaf:Organization> <foaf:name>Albert-Ludwigs-Universität Freiburg</foaf:name> </foaf:Organization> </org:memberOf> </rdf:Description> </dct:creator> <dct:title>Training material for single-cell RNA-seq data analysis (Galaxy Training Network tutorial)</dct:title> <dct:publisher> <foaf:Agent> <foaf:name>Zenodo</foaf:name> </foaf:Agent> </dct:publisher> <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2018</dct:issued> <dcat:keyword>single-cell RNA-seq</dcat:keyword> <dcat:keyword>scRNA</dcat:keyword> <dcat:keyword>Mus Musculus</dcat:keyword> <dcat:keyword>Training Data</dcat:keyword> <dcat:keyword>mm10</dcat:keyword> <dcat:keyword>celseq2</dcat:keyword> <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2018-08-15</dct:issued> <dct:language rdf:resource="http://publications.europa.eu/resource/authority/language/ENG"/> <owl:sameAs rdf:resource="https://zenodo.org/record/1345635"/> <adms:identifier> <adms:Identifier> <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/1345635</skos:notation> <adms:schemeAgency>url</adms:schemeAgency> </adms:Identifier> </adms:identifier> <dct:isVersionOf rdf:resource="https://doi.org/10.5281/zenodo.1345634"/> <dct:isPartOf rdf:resource="https://zenodo.org/communities/galaxy-training"/> <owl:versionInfo>v0.2</owl:versionInfo> <dct:description><p>The data provided here is part of the Galaxy Training Network tutorial that analyses single-cell RNA-seq data (scRNA) using cell barcodes and data from Freiburg MPI Gr&uuml;n Lab. This dataset (GEO Accession: <strong>GSM2668223</strong>) consists of paired-end data from the bone marrow of a 5-week old male C57 mouse, downsampled to facilitate ease-of-processing during live demonstration.</p> <p>The Plate/Batch datasets were generated from scripts.</p></dct:description> <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/> <dct:accessRights> <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess"> <rdfs:label>Open Access</rdfs:label> </dct:RightsStatement> </dct:accessRights> <dcat:distribution> <dcat:Distribution> <dct:license rdf:resource="https://creativecommons.org/licenses/by-sa/4.0/legalcode"/> <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.1345635"/> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>1344</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/celseq_barcodes.192.tabular</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>264668243</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/Mus_musculus.GRCm38.93.mm10.UCSC.ncbiRefSeq.gtf</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>1064613</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/P1_B1.tabular</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>1009137</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/P1_B2.tabular</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>999182</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/P2_B3.tabular</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>1090250</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/P2_B4.tabular</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>239104517</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/SRR5683689_1.fastq.gz</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.1345635</dcat:accessURL> <dcat:byteSize>686626827</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/1345635/files/SRR5683689_2.fastq.gz</dcat:downloadURL> </dcat:Distribution> </dcat:distribution> </rdf:Description> </rdf:RDF>
All versions | This version | |
---|---|---|
Views | 7,017 | 341 |
Downloads | 2,504 | 165 |
Data volume | 207.8 GB | 32.1 GB |
Unique views | 6,671 | 322 |
Unique downloads | 895 | 71 |