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Published December 19, 2014 | Version v1
Software Open

Size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis (code and data)

  • 1. INESC-ID/IST, Universidade de Lisboa
  • 2. UMMI, IMM/Faculdade de Medicina, Universidade de Lisboa

Description

Code and data used in our study "Not seeing the forest for the trees: Size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis". The original development repository is available at https://bitbucket.org/phyloviz/popsim-analysis. MLST datasets included for testing and experiments were retrieved on 2014-06-24 from MLST.net, PubMLST.org and Institute Pasteur, where more recent versions can be found.

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phyloviz-popsim-analysis-2eb612868bdb.zip

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Additional details

Related works

Is supplement to
10.1371/journal.pone.0119315 (DOI)