Software Open Access

omniCLIP: probabilistic identification of protein-RNA interactions from CLIP-seq data

Philipp Boss

 

omniCLIP is a Bayesian peak caller that can be applied to data from CLIP-Seq data to detect regulatory elements in RNAs.

Files (247.0 kB)
Name Size
diag_event_model.py
md5:cdff0beec56a78bd298f3e809bc532b6
4.8 kB Download
emission.py
md5:70c4782ada8d5b5df674de140004ae3f
43.5 kB Download
FitBinoDirchEmmisionProbabilities.py
md5:1bb258bfa0b7a4d7c51a01ac44c5af99
10.9 kB Download
GetCoverageFromBam.py
md5:fc49c6b6f19e528d3336fde5ccd7a9c8
11.5 kB Download
LoadReads.py
md5:caf5ad7768b0571b8c6fd22bbae513d6
7.1 kB Download
mixture_tools.py
md5:5142fd578fb9637a3a3b7645b52e62da
20.8 kB Download
multdirichletVect.py
md5:bfc02c8523a9be39d230c524780d89e5
6.5 kB Download
omniCLIP.py
md5:baec892428de974d08782f6a9d7ae0e6
42.0 kB Download
ReadFilter.py
md5:1a913c356b1ba654550109c3abb1a027
1.0 kB Download
sparse_glm.py
md5:c4742e0ebbbf4a20fe5728161d560710
12.0 kB Download
tools.py
md5:d4040bd992740dae17730f7325c6c864
47.8 kB Download
trans.py
md5:0144b8b999122fc68d182d93a1c691f1
39.1 kB Download
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