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Treeview 3.0 (beta 1) - Visualization and analysis of large data matrices

Keil, Christopher; Leach, Robert William; Faizaan, Shaik Mohammed; Bezawada, Srikanth; Parsons, Lance; Baryshnikova, Anastasia


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  <identifier identifierType="DOI">10.5281/zenodo.1303402</identifier>
  <creators>
    <creator>
      <creatorName>Keil, Christopher</creatorName>
      <givenName>Christopher</givenName>
      <familyName>Keil</familyName>
      <affiliation>University of Hamburg</affiliation>
    </creator>
    <creator>
      <creatorName>Leach, Robert William</creatorName>
      <givenName>Robert William</givenName>
      <familyName>Leach</familyName>
      <affiliation>Princeton University</affiliation>
    </creator>
    <creator>
      <creatorName>Faizaan, Shaik Mohammed</creatorName>
      <givenName>Shaik Mohammed</givenName>
      <familyName>Faizaan</familyName>
    </creator>
    <creator>
      <creatorName>Bezawada, Srikanth</creatorName>
      <givenName>Srikanth</givenName>
      <familyName>Bezawada</familyName>
    </creator>
    <creator>
      <creatorName>Parsons, Lance</creatorName>
      <givenName>Lance</givenName>
      <familyName>Parsons</familyName>
      <affiliation>Princeton University</affiliation>
    </creator>
    <creator>
      <creatorName>Baryshnikova, Anastasia</creatorName>
      <givenName>Anastasia</givenName>
      <familyName>Baryshnikova</familyName>
      <affiliation>Calico, LLC</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Treeview 3.0 (beta 1) - Visualization and analysis of large data matrices</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2018</publicationYear>
  <subjects>
    <subject>beta 1</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2018-06-27</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/1303402</alternateIdentifier>
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    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsNewVersionOf">10.5281/zenodo.160573</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.1303401</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/scientific_viz</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;Treeview 3.0 is an open-source Java app for visualizing large data matrices. It enables the user to load a dataset, navigate it,&amp;nbsp;cluster it, customize its appearance and export it (or parts of it) into a figure.&amp;nbsp;This upload&amp;nbsp;corresponds to the beta 1 version of Treeview 3.0 which was publicly released on June 27, 2018. More recent versions, as well as the source code, the issue tracker and the developer community, can be reached at https://bitbucket.org/TreeView3Dev/treeview3/.&lt;/p&gt;</description>
    <description descriptionType="Other">{"references": ["Eisen MB, Spellman PT, Brown PO, Botstein D, \"Cluster analysis and display of genome-wide expression patterns\", PNAS, 1998, 95:14863-14868", "Saldanha AJ, \"Java Treeview -- extensible visualization of microarray data\", Bioinformatics, 2004, 20(17):3246-3248"]}</description>
  </descriptions>
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