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Lifespan and fecundity data for: The evolutionary potential of diet-dependent effects on lifespan and fecundity in a multi-parental population of Drosophila melanogaster

Ng'oma, Enoch; Fidelis, Wilton; Middleton, Kevin M.; King, Elizabeth G.


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  <identifier identifierType="DOI">10.5281/zenodo.1285237</identifier>
  <creators>
    <creator>
      <creatorName>Ng'oma, Enoch</creatorName>
      <givenName>Enoch</givenName>
      <familyName>Ng'oma</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-6741-7922</nameIdentifier>
      <affiliation>Division of Biological Sciences, University of Missouri</affiliation>
    </creator>
    <creator>
      <creatorName>Fidelis, Wilton</creatorName>
      <givenName>Wilton</givenName>
      <familyName>Fidelis</familyName>
      <affiliation>Division of Biological Sciences, University of Missouri</affiliation>
    </creator>
    <creator>
      <creatorName>Middleton, Kevin M.</creatorName>
      <givenName>Kevin M.</givenName>
      <familyName>Middleton</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-4704-1064</nameIdentifier>
      <affiliation>Department of Pathology and Anatomical Sciences, University of Missouri School of Medicine</affiliation>
    </creator>
    <creator>
      <creatorName>King, Elizabeth G.</creatorName>
      <givenName>Elizabeth G.</givenName>
      <familyName>King</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-9393-4720</nameIdentifier>
      <affiliation>Division of Biological Sciences, University of Missouri</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Lifespan and fecundity data for: The evolutionary potential of diet-dependent effects on lifespan and fecundity in a multi-parental population of Drosophila melanogaster</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2018</publicationYear>
  <subjects>
    <subject>lifespan, fecundity, heritability, GEI, genetic correlation, multiparent</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2018-06-07</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/1285237</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.1285236</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This repository contains 3 original data files for a study of heritability in a half-sibling design of outbred multi-parent population of Drosophila melanogaster treated with 3 nutritional conditions.&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;1) lifespan_only.xlsx contains lifespan records.&lt;/p&gt;

&lt;p&gt;Columns:&lt;/p&gt;

&lt;p&gt;setDate, start date&lt;/p&gt;

&lt;p&gt;flipDate, observation date&lt;/p&gt;

&lt;p&gt;days, age&lt;/p&gt;

&lt;p&gt;fID, identity of line&lt;/p&gt;

&lt;p&gt;repl, replicate number&lt;/p&gt;

&lt;p&gt;treat, diet treatment (HS=high sugar, STD=standard, LY=low yeast)&lt;/p&gt;

&lt;p&gt;NstartF, starting number of females&lt;/p&gt;

&lt;p&gt;NstartM, starting number of males&lt;/p&gt;

&lt;p&gt;box, ccord, rcoord are position coordinates of a vial in a holding box&lt;/p&gt;

&lt;p&gt;deadF, number of female dead&lt;/p&gt;

&lt;p&gt;deadM, number of males dead&lt;/p&gt;

&lt;p&gt;cens, censored events&lt;/p&gt;

&lt;p&gt;carriedF, dead females that flip to a new food vial&lt;/p&gt;

&lt;p&gt;carriedM, dead males that flip to a new food vial&lt;/p&gt;

&lt;p&gt;flipper initials of observer&lt;/p&gt;

&lt;p&gt;time, time in which 108 vials were flipped.&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;2) feclife_with-image-ids.xlsx - lifespan observation vials are matched with a specific image of eggs collected at a specific day (once a week).&lt;/p&gt;

&lt;p&gt;Columns:&lt;/p&gt;

&lt;p&gt;cameraid, image id assigned by the camera&lt;/p&gt;

&lt;p&gt;handcounted, images counted by hand&lt;/p&gt;

&lt;p&gt;handcount, number of eggs on an image counted by hand&lt;/p&gt;

&lt;p&gt;training_set, images that were used to develop and test a prediction model&lt;/p&gt;

&lt;p&gt;drop_from_lifespan &amp;amp; visually_recheck, quality control.&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;3) egg_images.tgz - all original images. Each image represent fecundity from a single vial at a specific date (in feclife_with-image-ids.xlsx ). The images have been cropped to remove the excess area outside the egg disc. The area outside the circular disc has been converted to black to peripheral eliminate noise.&lt;/p&gt;</description>
  </descriptions>
</resource>
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