Dataset Open Access
Nekrutenko, Anton
<?xml version='1.0' encoding='utf-8'?> <oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd"> <dc:creator>Nekrutenko, Anton</dc:creator> <dc:date>2018-05-22</dc:date> <dc:description>The majority of life on Earth is non-diploid and represented by prokaryotes, viruses and their derivatives such as our own mitochondria or plant’s chloroplasts. In non-diploid systems allele frequencies can range anywhere between 0 and 100% and there could be multiple (not just two) alleles per locus. The main challenge associated with non-diploid variant calling is the difficulty in distinguishing between sequencing noise (abundant in all NGS platforms) and true low frequency variants. </dc:description> <dc:identifier>https://zenodo.org/record/1251112</dc:identifier> <dc:identifier>10.5281/zenodo.1251112</dc:identifier> <dc:identifier>oai:zenodo.org:1251112</dc:identifier> <dc:relation>doi:10.5281/zenodo.1251111</dc:relation> <dc:relation>url:https://zenodo.org/communities/galaxy-training</dc:relation> <dc:rights>info:eu-repo/semantics/openAccess</dc:rights> <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights> <dc:title>Training material for Calling variants in non-diploid systems</dc:title> <dc:type>info:eu-repo/semantics/other</dc:type> <dc:type>dataset</dc:type> </oai_dc:dc>
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