Dataset Open Access

BeechCOSTe52 Database

Robson, T. Matthew; Benito Garzón, Marta; Alia Miranda, Ricardo; Barba Egido, Diana; Bogdan, Saša; Borovics, Attila; Božič, Gregor; Brendel, Oliver; Clark, Jo; De Vries, Sven M G; Delehan, Ivan I.; Doody, Pat; Ducousso, Alexis; Fady, Bruno; Fennessy, John; Forstreuter, Manfred; Frýdl, Josef; Geburek,Thomas; Gömöry, Dušan; Hauke-Kowalska, Maria; Huber, Gerhard; Ibañez, Juan Ignacio; Ioniţă, Lucia; Ivankovič, Mladen; Kehlet Hansen, Jon; Kóczán-Horváth, Anikó; Kraigher, Hojka; Kranenborg, K Gert; Lee, Steve; Liesebach, Mirko; Mátyás, Csaba; Mertens, Patrick; Muhs, Hans-Joachim; Novotný, Petr; Parnuţa, Gheorghe; Paule, Ladislav; Picardo, Alvaro; Rasztovics, Ervin; Rogge, Martin; Stener, Lars-Göran; Sułkowska, Małgorzata; Urban, Otmar; v. Wuehlisch, Georg; Vendramin, Giovanni G; Vettori, Cristina; Wesoły, Wojciech


JSON-LD (schema.org) Export

{
  "inLanguage": {
    "alternateName": "eng", 
    "@type": "Language", 
    "name": "English"
  }, 
  "description": "<p>The BeechCOSTe52 includes phenotypic trait measurements from individual trees measured in an international network of provenance tests compiled by the COST Action E52 (2006 &ndash; 2010). It comprises 39 trial sites and 217 provenances covering the distribution of European beech (<em>Fagus sylvatica</em> L.). The BeechCOSTe52 database provides individual tree phenotypic measurements of height, diameter at breast height, basal diameter, mortality, spring and autumn leaf phenology. The following files are included:</p>\n\n<p><strong>Fsylvatica.csv</strong>: individual tree measurements by trial and provenance of origin.</p>\n\n<p><strong>Trials_coords.csv</strong>: geographical coordinates of the trials</p>\n\n<p><strong>Prov_coords.cvs</strong>: geographical coordinates of the provenances</p>\n\n<p><strong>BeechCOSTe52_metadata_descriptor.docx</strong>: description of the fields of Fsylvatica.csv, Trials_coords.csv and Prov_coords.cvs databases.</p>\n\n<p><strong>Subset_by_trial.R: </strong>R script to subset the original database (<strong>Fsylvatica.csv</strong>) by trial</p>\n\n<p><strong>Merge_trial_prov-coords_individualmeasurements.R</strong>:&nbsp; R script to merge the coordinates of trials and provenances (<strong>Trials_coords.csv </strong>and<strong> Prov_coords.cvs</strong>) with the phenotypic measurements (<strong>Fsylvatica.csv)</strong>.</p>\n\n<p><strong>Plot_Trial-Prov_locations.R:</strong> R script to map trial and provenance locations.</p>\n\n<p><strong>Hplot.R</strong>: R script to map tree height variation across provenances and trials.</p>\n\n<p><strong>Subset_by_trait.R: </strong>R script to subset the original database (Fsylvatica.csv) by trait (H, DBH, mortality, spring and autumn phenology.</p>\n\n<p><strong>Fagus_sylvatica_EUFORGEN.X:</strong> Shape files containing the distribution of Fagus sylvatica from EUFORGEN (http://www.euforgen.org)</p>\n\n<p><strong>Additional information</strong>: pdf files containing the description of the genetic trials, R scripts to check the database and COST Proceedings and related projects.</p>\n\n<p>&nbsp;</p>\n\n<p>&nbsp;</p>\n\n<p>&nbsp;</p>", 
  "license": "http://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "Viikki Plant Science Centre (ViPS), Faculty of Biological and Environm  ental Sciences, University of   Helsinki, Finland", 
      "@id": "https://orcid.org/0000-0002-8631-796X", 
      "@type": "Person", 
      "name": "Robson, T. Matthew"
    }, 
    {
      "affiliation": "UMR 1202 Biodiversit\u00e9 G\u00e8nes & Communaut\u00e9s, INRA, Universit\u00e9 Bordeaux, France", 
      "@type": "Person", 
      "name": "Benito  Garz\u00f3n, Marta"
    }, 
    {
      "affiliation": "Insitituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, INIA, Madrid, Spain", 
      "@type": "Person", 
      "name": "Alia Miranda, Ricardo"
    }, 
    {
      "affiliation": "Insitituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, INIA, Madrid, Spain", 
      "@type": "Person", 
      "name": "Barba Egido, Diana"
    }, 
    {
      "affiliation": "University of Zagreb, Faculty of Forestry, Croatia", 
      "@type": "Person", 
      "name": "Bogdan, Sa\u0161a"
    }, 
    {
      "affiliation": "Hungarian Forest Research Institute, Hungary", 
      "@type": "Person", 
      "name": "Borovics, Attila"
    }, 
    {
      "affiliation": "Slovenian Forestry Institute, Ljubljana, Slovenia", 
      "@type": "Person", 
      "name": "Bo\u017ei\u010d, Gregor"
    }, 
    {
      "affiliation": "UMR EEF, INRA, Universit\u00e9 de Lorraine, F-54280 Champenoux, France", 
      "@type": "Person", 
      "name": "Brendel, Oliver"
    }, 
    {
      "affiliation": "Earth Trust, Little Wittenham, Abingdon, Oxon, OX14 4QZ, U.K.", 
      "@type": "Person", 
      "name": "Clark, Jo"
    }, 
    {
      "affiliation": "Alterra Environmental Research, Wageningen University and Research Centre, Wageningen, The Netherlands", 
      "@type": "Person", 
      "name": "De Vries, Sven M G"
    }, 
    {
      "affiliation": "Ukrainian State University of Forestry and Wood Technology, Faculty of Forestry, Lviv, Ukraine", 
      "@type": "Person", 
      "name": "Delehan, Ivan I."
    }, 
    {
      "affiliation": "COILLTE Forest Research Laboratory, Newtownmountkennedy, Ireland.", 
      "@type": "Person", 
      "name": "Doody, Pat"
    }, 
    {
      "affiliation": "BIOGECO,  INRA, Universite de Bordeaux, 33610, Cestas, France", 
      "@type": "Person", 
      "name": "Ducousso, Alexis"
    }, 
    {
      "affiliation": "URFM, INRA, Domaine St. Paul 84914, Avignon, France.", 
      "@type": "Person", 
      "name": "Fady, Bruno"
    }, 
    {
      "affiliation": "COILLTE Forest Research Laboratory, Newtownmountkennedy, Ireland.", 
      "@type": "Person", 
      "name": "Fennessy, John"
    }, 
    {
      "affiliation": "FU Berlin, Germany BW", 
      "@type": "Person", 
      "name": "Forstreuter, Manfred"
    }, 
    {
      "affiliation": "Forestry and Game Management Research Institute, Strnady 136, 25202, J\u00edlovi\u0161t\u011b. Czech Republic.", 
      "@type": "Person", 
      "name": "Fr\u00fddl, Josef"
    }, 
    {
      "affiliation": "Federal Forest Research Centre, Vienna, Austria.", 
      "@type": "Person", 
      "name": "Geburek,Thomas"
    }, 
    {
      "affiliation": "Faculty of Forestry, Technical University, 96053, Zvolen, Slovakia", 
      "@type": "Person", 
      "name": "G\u00f6m\u00f6ry, Du\u0161an"
    }, 
    {
      "affiliation": "Pozna\u0144 University of Life Sciences, Department of Forest Silviculture, Poznan, Poland", 
      "@type": "Person", 
      "name": "Hauke-Kowalska, Maria"
    }, 
    {
      "affiliation": "Bavarian Office for Forest Seeding and Planting (ASP), Germany.", 
      "@type": "Person", 
      "name": "Huber, Gerhard"
    }, 
    {
      "affiliation": "Forest Service, La Rioja, Logro\u00f1o, Spain", 
      "@type": "Person", 
      "name": "Iba\u00f1ez, Juan Ignacio"
    }, 
    {
      "affiliation": "Academy of Agriculture and Silviculture, Bucharest, Romania", 
      "@type": "Person", 
      "name": "Ioni\u0163\u0103, Lucia"
    }, 
    {
      "affiliation": "University of Zagreb, Faculty of Forestry, Croatia.", 
      "@type": "Person", 
      "name": "Ivankovi\u010d, Mladen"
    }, 
    {
      "affiliation": "University of Copenhagen, Department of Geosciences and Natural Resource Management, Section for Forest, Nature and Biomass, Copenhagen, Denmark.", 
      "@type": "Person", 
      "name": "Kehlet Hansen, Jon"
    }, 
    {
      "affiliation": "University Sopron, Inst. Env. and Earth Sciences, Hungary.", 
      "@type": "Person", 
      "name": "K\u00f3cz\u00e1n-Horv\u00e1th, Anik\u00f3"
    }, 
    {
      "affiliation": "Slovenian Forestry Institute, Ljubljana, Slovenia", 
      "@type": "Person", 
      "name": "Kraigher, Hojka"
    }, 
    {
      "affiliation": "Alterra Environmental Research, Wageningen University and Research Centre, Wageningen, The Netherlands", 
      "@type": "Person", 
      "name": "Kranenborg, K Gert"
    }, 
    {
      "affiliation": "Forest Research, Northern Research Station, Roslin, Midlothian, U.K.", 
      "@type": "Person", 
      "name": "Lee, Steve"
    }, 
    {
      "affiliation": "Th\u00fcnen Institute of Forest Genetics, Grosshansdorf, Germany.", 
      "@type": "Person", 
      "name": "Liesebach, Mirko"
    }, 
    {
      "affiliation": "University Sopron, Inst. Env. and Earth Sciences, Hungary.", 
      "@type": "Person", 
      "name": "M\u00e1ty\u00e1s, Csaba"
    }, 
    {
      "affiliation": "Station de Recherches Foresti\u00e8res, Gembloux, Belgium.", 
      "@type": "Person", 
      "name": "Mertens, Patrick"
    }, 
    {
      "affiliation": "Th\u00fcnen Institute of Forest Genetics, Grosshansdorf, Germany.", 
      "@type": "Person", 
      "name": "Muhs, Hans-Joachim"
    }, 
    {
      "affiliation": "Forestry and Game Management Research Institute, Strnady 136, 25202, J\u00edlovi\u0161t\u011b. Czech Republic.", 
      "@type": "Person", 
      "name": "Novotn\u00fd, Petr"
    }, 
    {
      "affiliation": "Academy of Agriculture and Silviculture, Bucharest, Romania.", 
      "@type": "Person", 
      "name": "Parnu\u0163a, Gheorghe"
    }, 
    {
      "affiliation": "Faculty of Forestry, Technical University, 96053, Zvolen, Slovakia.", 
      "@type": "Person", 
      "name": "Paule, Ladislav"
    }, 
    {
      "affiliation": "Directorate of Environment, Junta de Castilla y Le\u00f3n, Valladolid, Spain.", 
      "@type": "Person", 
      "name": "Picardo, Alvaro"
    }, 
    {
      "affiliation": "Hungarian Forest Research Institute, Hungary.", 
      "@type": "Person", 
      "name": "Rasztovics, Ervin"
    }, 
    {
      "affiliation": "Landesbetrieb Wald und Holz NRW, Arnsberg, Germany.", 
      "@type": "Person", 
      "name": "Rogge, Martin"
    }, 
    {
      "affiliation": "The forestry Research Institute of Sweden, Ekebo, Sweden", 
      "@type": "Person", 
      "name": "Stener, Lars-G\u00f6ran"
    }, 
    {
      "affiliation": "Forest Research Institute, Warsaw, Poland.", 
      "@type": "Person", 
      "name": "Su\u0142kowska, Ma\u0142gorzata"
    }, 
    {
      "affiliation": "CZECHGLOBE Global Change Research Institute CAS, Czech Republic.", 
      "@type": "Person", 
      "name": "Urban, Otmar"
    }, 
    {
      "affiliation": "Th\u00fcnen Institute of Forest Genetics, Grosshansdorf, Germany.", 
      "@type": "Person", 
      "name": "v. Wuehlisch, Georg"
    }, 
    {
      "affiliation": "Institute of Biosciences and BioResources, National Research Council, Italy.", 
      "@type": "Person", 
      "name": "Vendramin, Giovanni G"
    }, 
    {
      "affiliation": "Institute of Biosciences and BioResources, National Research Council, Italy.", 
      "@type": "Person", 
      "name": "Vettori,  Cristina"
    }, 
    {
      "affiliation": "Pozna\u0144 University of Life Sciences, Department of Forest Silviculture, Poznan, Poland.", 
      "@type": "Person", 
      "name": "Weso\u0142y, Wojciech"
    }
  ], 
  "url": "https://zenodo.org/record/1240931", 
  "datePublished": "2018-05-07", 
  "version": "version 3.0", 
  "keywords": [
    "genetic trial", 
    "European beech", 
    "tree height", 
    "leaf phenology", 
    "mortality", 
    "provenance test"
  ], 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Additional Information.zip", 
      "@type": "DataDownload", 
      "fileFormat": "zip"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/BeechCOSTe52_ metadata_descriptor.docx", 
      "@type": "DataDownload", 
      "fileFormat": "docx"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.dbf", 
      "@type": "DataDownload", 
      "fileFormat": "dbf"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.prj", 
      "@type": "DataDownload", 
      "fileFormat": "prj"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.sbn", 
      "@type": "DataDownload", 
      "fileFormat": "sbn"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.sbx", 
      "@type": "DataDownload", 
      "fileFormat": "sbx"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.shp", 
      "@type": "DataDownload", 
      "fileFormat": "shp"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.shp.xml", 
      "@type": "DataDownload", 
      "fileFormat": "xml"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fagus_sylvatica_EUFORGEN.shx", 
      "@type": "DataDownload", 
      "fileFormat": "shx"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Fsylvatica.csv", 
      "@type": "DataDownload", 
      "fileFormat": "csv"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Hplot.R", 
      "@type": "DataDownload", 
      "fileFormat": "r"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/merge-trial-prov-coords_individualmeasurements.R", 
      "@type": "DataDownload", 
      "fileFormat": "r"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Plot_Trial-Prov_locations.R", 
      "@type": "DataDownload", 
      "fileFormat": "r"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Prov_coords.csv", 
      "@type": "DataDownload", 
      "fileFormat": "csv"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Subset_by_trait.R", 
      "@type": "DataDownload", 
      "fileFormat": "r"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Subset_by_trial.R", 
      "@type": "DataDownload", 
      "fileFormat": "r"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/260fe04c-d39c-4267-9da8-3b5853a4e9bf/Trial_coords.csv", 
      "@type": "DataDownload", 
      "fileFormat": "csv"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.1240931", 
  "@id": "https://doi.org/10.5281/zenodo.1240931", 
  "@type": "Dataset", 
  "name": "BeechCOSTe52 Database"
}
1,425
308
views
downloads
All versions This version
Views 1,4251,271
Downloads 308247
Data volume 5.6 GB4.7 GB
Unique views 1,3291,193
Unique downloads 11281

Share

Cite as