Dataset Open Access

BeechCOSTe52 Database

Robson, T. Matthew; Benito Garzón, Marta; Alia Miranda, Ricardo; Barba Egido, Diana; Bogdan, Saša; Borovics, Attila; Božič, Gregor; Brendel, Oliver; Clark, Jo; De Vries, Sven M G; Delehan, Ivan I.; Doody, Pat; Ducousso, Alexis; Fady, Bruno; Fennessy, John; Forstreuter, Manfred; Frýdl, Josef; Geburek,Thomas; Gömöry, Dušan; Hauke-Kowalska, Maria; Huber, Gerhard; Ibañez, Juan Ignacio; Ioniţă, Lucia; Ivankovič, Mladen; Kehlet Hansen, Jon; Kóczán-Horváth, Anikó; Kraigher, Hojka; Kranenborg, K Gert; Lee, Steve; Liesebach, Mirko; Mátyás, Csaba; Mertens, Patrick; Muhs, Hans-Joachim; Novotný, Petr; Parnuţa, Gheorghe; Paule, Ladislav; Picardo, Alvaro; Rasztovics, Ervin; Rogge, Martin; Stener, Lars-Göran; Sułkowska, Małgorzata; Urban, Otmar; v. Wuehlisch, Georg; Vendramin, Giovanni G; Vettori, Cristina; Wesoły, Wojciech


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    "description": "<p>The BeechCOSTe52 includes phenotypic trait measurements from individual trees measured in an international network of provenance tests compiled by the COST Action E52 (2006 &ndash; 2010). It comprises 39 trial sites and 217 provenances covering the distribution of European beech (<em>Fagus sylvatica</em> L.). The BeechCOSTe52 database provides individual tree phenotypic measurements of height, diameter at breast height, basal diameter, mortality, spring and autumn leaf phenology. The following files are included:</p>\n\n<p><strong>Fsylvatica.csv</strong>: individual tree measurements by trial and provenance of origin.</p>\n\n<p><strong>Trials_coords.csv</strong>: geographical coordinates of the trials</p>\n\n<p><strong>Prov_coords.cvs</strong>: geographical coordinates of the provenances</p>\n\n<p><strong>BeechCOSTe52_metadata_descriptor.docx</strong>: description of the fields of Fsylvatica.csv, Trials_coords.csv and Prov_coords.cvs databases.</p>\n\n<p><strong>Subset_by_trial.R: </strong>R script to subset the original database (<strong>Fsylvatica.csv</strong>) by trial</p>\n\n<p><strong>Merge_trial_prov-coords_individualmeasurements.R</strong>:&nbsp; R script to merge the coordinates of trials and provenances (<strong>Trials_coords.csv </strong>and<strong> Prov_coords.cvs</strong>) with the phenotypic measurements (<strong>Fsylvatica.csv)</strong>.</p>\n\n<p><strong>Plot_Trial-Prov_locations.R:</strong> R script to map trial and provenance locations.</p>\n\n<p><strong>Hplot.R</strong>: R script to map tree height variation across provenances and trials.</p>\n\n<p><strong>Subset_by_trait.R: </strong>R script to subset the original database (Fsylvatica.csv) by trait (H, DBH, mortality, spring and autumn phenology.</p>\n\n<p><strong>Fagus_sylvatica_EUFORGEN.X:</strong> Shape files containing the distribution of Fagus sylvatica from EUFORGEN (http://www.euforgen.org)</p>\n\n<p><strong>Additional information</strong>: pdf files containing the description of the genetic trials, R scripts to check the database and COST Proceedings and related projects.</p>\n\n<p>&nbsp;</p>\n\n<p>&nbsp;</p>\n\n<p>&nbsp;</p>", 
    "license": {
      "id": "CC-BY-4.0"
    }, 
    "title": "BeechCOSTe52 Database", 
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    "language": "eng", 
    "version": "version 3.0", 
    "keywords": [
      "genetic trial", 
      "European beech", 
      "tree height", 
      "leaf phenology", 
      "mortality", 
      "provenance test"
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    "publication_date": "2018-05-07", 
    "creators": [
      {
        "orcid": "0000-0002-8631-796X", 
        "affiliation": "Viikki Plant Science Centre (ViPS), Faculty of Biological and Environm  ental Sciences, University of   Helsinki, Finland", 
        "name": "Robson, T. Matthew"
      }, 
      {
        "affiliation": "UMR 1202 Biodiversit\u00e9 G\u00e8nes & Communaut\u00e9s, INRA, Universit\u00e9 Bordeaux, France", 
        "name": "Benito  Garz\u00f3n, Marta"
      }, 
      {
        "affiliation": "Insitituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, INIA, Madrid, Spain", 
        "name": "Alia Miranda, Ricardo"
      }, 
      {
        "affiliation": "Insitituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, INIA, Madrid, Spain", 
        "name": "Barba Egido, Diana"
      }, 
      {
        "affiliation": "University of Zagreb, Faculty of Forestry, Croatia", 
        "name": "Bogdan, Sa\u0161a"
      }, 
      {
        "affiliation": "Hungarian Forest Research Institute, Hungary", 
        "name": "Borovics, Attila"
      }, 
      {
        "affiliation": "Slovenian Forestry Institute, Ljubljana, Slovenia", 
        "name": "Bo\u017ei\u010d, Gregor"
      }, 
      {
        "affiliation": "UMR EEF, INRA, Universit\u00e9 de Lorraine, F-54280 Champenoux, France", 
        "name": "Brendel, Oliver"
      }, 
      {
        "affiliation": "Earth Trust, Little Wittenham, Abingdon, Oxon, OX14 4QZ, U.K.", 
        "name": "Clark, Jo"
      }, 
      {
        "affiliation": "Alterra Environmental Research, Wageningen University and Research Centre, Wageningen, The Netherlands", 
        "name": "De Vries, Sven M G"
      }, 
      {
        "affiliation": "Ukrainian State University of Forestry and Wood Technology, Faculty of Forestry, Lviv, Ukraine", 
        "name": "Delehan, Ivan I."
      }, 
      {
        "affiliation": "COILLTE Forest Research Laboratory, Newtownmountkennedy, Ireland.", 
        "name": "Doody, Pat"
      }, 
      {
        "affiliation": "BIOGECO,  INRA, Universite de Bordeaux, 33610, Cestas, France", 
        "name": "Ducousso, Alexis"
      }, 
      {
        "affiliation": "URFM, INRA, Domaine St. Paul 84914, Avignon, France.", 
        "name": "Fady, Bruno"
      }, 
      {
        "affiliation": "COILLTE Forest Research Laboratory, Newtownmountkennedy, Ireland.", 
        "name": "Fennessy, John"
      }, 
      {
        "affiliation": "FU Berlin, Germany BW", 
        "name": "Forstreuter, Manfred"
      }, 
      {
        "affiliation": "Forestry and Game Management Research Institute, Strnady 136, 25202, J\u00edlovi\u0161t\u011b. Czech Republic.", 
        "name": "Fr\u00fddl, Josef"
      }, 
      {
        "affiliation": "Federal Forest Research Centre, Vienna, Austria.", 
        "name": "Geburek,Thomas"
      }, 
      {
        "affiliation": "Faculty of Forestry, Technical University, 96053, Zvolen, Slovakia", 
        "name": "G\u00f6m\u00f6ry, Du\u0161an"
      }, 
      {
        "affiliation": "Pozna\u0144 University of Life Sciences, Department of Forest Silviculture, Poznan, Poland", 
        "name": "Hauke-Kowalska, Maria"
      }, 
      {
        "affiliation": "Bavarian Office for Forest Seeding and Planting (ASP), Germany.", 
        "name": "Huber, Gerhard"
      }, 
      {
        "affiliation": "Forest Service, La Rioja, Logro\u00f1o, Spain", 
        "name": "Iba\u00f1ez, Juan Ignacio"
      }, 
      {
        "affiliation": "Academy of Agriculture and Silviculture, Bucharest, Romania", 
        "name": "Ioni\u0163\u0103, Lucia"
      }, 
      {
        "affiliation": "University of Zagreb, Faculty of Forestry, Croatia.", 
        "name": "Ivankovi\u010d, Mladen"
      }, 
      {
        "affiliation": "University of Copenhagen, Department of Geosciences and Natural Resource Management, Section for Forest, Nature and Biomass, Copenhagen, Denmark.", 
        "name": "Kehlet Hansen, Jon"
      }, 
      {
        "affiliation": "University Sopron, Inst. Env. and Earth Sciences, Hungary.", 
        "name": "K\u00f3cz\u00e1n-Horv\u00e1th, Anik\u00f3"
      }, 
      {
        "affiliation": "Slovenian Forestry Institute, Ljubljana, Slovenia", 
        "name": "Kraigher, Hojka"
      }, 
      {
        "affiliation": "Alterra Environmental Research, Wageningen University and Research Centre, Wageningen, The Netherlands", 
        "name": "Kranenborg, K Gert"
      }, 
      {
        "affiliation": "Forest Research, Northern Research Station, Roslin, Midlothian, U.K.", 
        "name": "Lee, Steve"
      }, 
      {
        "affiliation": "Th\u00fcnen Institute of Forest Genetics, Grosshansdorf, Germany.", 
        "name": "Liesebach, Mirko"
      }, 
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        "affiliation": "University Sopron, Inst. Env. and Earth Sciences, Hungary.", 
        "name": "M\u00e1ty\u00e1s, Csaba"
      }, 
      {
        "affiliation": "Station de Recherches Foresti\u00e8res, Gembloux, Belgium.", 
        "name": "Mertens, Patrick"
      }, 
      {
        "affiliation": "Th\u00fcnen Institute of Forest Genetics, Grosshansdorf, Germany.", 
        "name": "Muhs, Hans-Joachim"
      }, 
      {
        "affiliation": "Forestry and Game Management Research Institute, Strnady 136, 25202, J\u00edlovi\u0161t\u011b. Czech Republic.", 
        "name": "Novotn\u00fd, Petr"
      }, 
      {
        "affiliation": "Academy of Agriculture and Silviculture, Bucharest, Romania.", 
        "name": "Parnu\u0163a, Gheorghe"
      }, 
      {
        "affiliation": "Faculty of Forestry, Technical University, 96053, Zvolen, Slovakia.", 
        "name": "Paule, Ladislav"
      }, 
      {
        "affiliation": "Directorate of Environment, Junta de Castilla y Le\u00f3n, Valladolid, Spain.", 
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        "affiliation": "The forestry Research Institute of Sweden, Ekebo, Sweden", 
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        "affiliation": "Pozna\u0144 University of Life Sciences, Department of Forest Silviculture, Poznan, Poland.", 
        "name": "Weso\u0142y, Wojciech"
      }
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