Dataset Open Access

Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex

Upla, Paula; Kim, Seung Joong; Sampathkumar, Parthasarathy; Dutta, Kaushik; Cahill, Sean M.; Chemmama, Ilan E.; Williams, Rosemary; Bonanno, Jeffrey B.; Rice, William J.; Stokes, David L.; Cowburn, David; Almo, Steven C.; Sali, Andrej; Rout, Michael P.; Fernandez-Martinez, Javier

Data manager(s)
Webb, Benjamin

This repository contains the modeling files and the analysis related to the article "Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex" by Upla et al. in Structure 2017.

For more information about how to reproduce this modeling, see the Sali lab website or the README file.

Files (988.7 MB)
Name Size
analysis.zip
md5:2b555f1fb09d576b716f72d41770b39d
155.1 MB Download
cluster0.dcd
md5:0dad08644a588f6574b2b554bb7c6944
3.9 MB Download
data.zip
md5:eb6ed9f36e88303eb345c7bd071dab87
32.8 MB Download
EM2D_class_averages.zip
md5:a9e5cc6213da8165bbb3925c7d59214b
14.6 MB Download
em2d_T1_truncation_1-1135.zip
md5:3a23ef9ae1f3cef820e38d5d93c2abd4
2.9 MB Download
em2d_T2_truncation_1-936.zip
md5:cf13827b2e997b5114ef2fff69c091d2
3.6 MB Download
em3d_density.zip
md5:15dc8bcf6070d0ee82bc54037ca3e5bf
18.0 MB Download
kmeans_1000_2.zip
md5:0686a1d8bd36e742b24c7167fd9d357f
33.5 MB Download
modeling_trajectories_set1.tar.xz
md5:4c0b83144c8cc92a9a1e93f54ca351b3
35.2 MB Download
modeling_trajectories_set2.tar.xz
md5:4ff3dc99911aa1d00d218737340ed049
23.1 MB Download
modeling_trajectories_set3.tar.xz
md5:0a2da6d60a7254483d77474d8429262a
3.3 MB Download
modeling_trajectories_set4.tar.xz
md5:a9c3319a2a29919a271039a676d9b0a8
39.1 MB Download
modeling_trajectories_set5_within_NPC.tar.xz
md5:24169b1829282df4e8cfc1faa0f91eed
225.9 MB Download
MODELLER_26994.zip
md5:35b43eaf2d093a6876c82f6948be6e82
301.8 MB Download
MODELLER_all.zip
md5:db34b2efbaccb46ac9cd018ffe2d2cdc
17.6 MB Download
pom152-master.zip
md5:9676dd93fbcc87c24b95de983c4c7de4
57.4 MB Download
Pom152_em3d_Final.zip
md5:540de03805111e09c3301b2fb4a36ec8
20.6 MB Download
template.zip
md5:e7a437d5a59cde21f3b82a9709490dc0
316.9 kB Download
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