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shaunpwilkinson/aphid: aphid v1.1.0

Shaun Wilkinson

aphid 1.1.0

  • Added posterior probabilities for PHMMs.

  • derivePHMM.list seed selection changed from max length to most common length.

  • Fixed issue in 'align' causing distance matrix error if seqweights not set to NULL (thanks to Ben Margetts for bug report).

  • Updated dependency list to include kmer instead of phylogram.

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