Software Open Access
Lj Miranda
{ "description": "Minor Release (v0.1.1)\n<p>This is a minor release of <code>gym-lattice</code>, an HP 2D-Lattice environment with a Gym-like API for the protein folding problem. This release focuses on fixing the <code>compute_free_energy()</code> function and improving the documentation in the <code>README</code>.</p>\nFixing the <code>compute_free_energy()</code> function\n<p>As it turns out, the previous implementation of the free energy computation includes the adjacent H-H pairs even if they are neighbors in the sequence. The standard computation should not include that. This release fixes the problem and updated the expected values during testing.</p>\nBetter documentation in the <code>README</code>.\n<p>Instead of manually building assets in a graphical software, all images are now created using LaTeX. We use the <code>standalone</code> package to generate PNG files from our TeX files. This gives a cleaner version of our images, and hopefully a better representation of our problem space.</p>", "license": "", "creator": [ { "affiliation": "Waseda University", "@type": "Person", "name": "Lj Miranda" } ], "url": "https://zenodo.org/record/1220163", "codeRepository": "https://github.com/ljvmiranda921/gym-lattice/tree/v0.1.1", "datePublished": "2018-04-18", "version": "v0.1.1", "@context": "https://schema.org/", "identifier": "https://doi.org/10.5281/zenodo.1220163", "@id": "https://doi.org/10.5281/zenodo.1220163", "@type": "SoftwareSourceCode", "name": "ljvmiranda921/gym-lattice: Minor Release (v0.1.1)" }
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Unique downloads | 3 | 3 |