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ljvmiranda921/gym-lattice: Minor Release (v0.1.1)

Lj Miranda


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    <dct:title>ljvmiranda921/gym-lattice: Minor Release (v0.1.1)</dct:title>
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    <dct:description>Minor Release (v0.1.1) &lt;p&gt;This is a minor release of &lt;code&gt;gym-lattice&lt;/code&gt;, an HP 2D-Lattice environment with a Gym-like API for the protein folding problem. This release focuses on fixing the &lt;code&gt;compute_free_energy()&lt;/code&gt; function and improving the documentation in the &lt;code&gt;README&lt;/code&gt;.&lt;/p&gt; Fixing the &lt;code&gt;compute_free_energy()&lt;/code&gt; function &lt;p&gt;As it turns out, the previous implementation of the free energy computation includes the adjacent H-H pairs even if they are neighbors in the sequence. The standard computation should not include that. This release fixes the problem and updated the expected values during testing.&lt;/p&gt; Better documentation in the &lt;code&gt;README&lt;/code&gt;. &lt;p&gt;Instead of manually building assets in a graphical software, all images are now created using LaTeX. We use the &lt;code&gt;standalone&lt;/code&gt; package to generate PNG files from our TeX files. This gives a cleaner version of our images, and hopefully a better representation of our problem space.&lt;/p&gt;</dct:description>
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