January 25, 2017 Dataset Open Access

Alasoo, Kaur; Gaffney, Daniel

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    "description": "<p><strong>RNA-seq files:</strong></p>\n\n<ol>\n\t<li>RNA_count_matrix.txt.gz - raw read counts</li>\n\t<li>RNA_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package</li>\n\t<li>RNA_gene_metadata.txt.gz - information about the genes</li>\n\t<li>RNA_sample_metadata.txt.gz - information about the samples</li>\n</ol>\n\n<p><strong>ATAC-seq files:</strong></p>\n\n<ol>\n\t<li>ATAC_count_matrix.txt.gz - raw read counts</li>\n\t<li>ATAC_cqn_matrix.txt.gz - read counts quantile normalised with the cqn R package</li>\n\t<li>ATAC_peak_metadata.txt.gz - peak coordinates and other metadata</li>\n\t<li>ATAC_sample_metadata.txt.gz - sample metadata</li>\n\t<li>ATAC_consensus_peaks.gff3.gz - GFF3 file containing the GRCh38 coordinates of the peaks</li>\n</ol>", 
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    "title": "Processed read counts from macrophage RNA-seq and ATAC-seq experiments", 
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        "affiliation": "Wellcome Trust Sanger Institute", 
        "name": "Alasoo, Kaur"
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