February 14, 2018 Journal article Open Access

Kaur Alasoo

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  <identifier identifierType="DOI">10.5281/zenodo.1173306</identifier>
  <creators>
    <creator>
      <creatorName>Kaur Alasoo</creatorName>
      <affiliation>University of Tartu</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Sample paired-end RNA-seq data from four human macophage samples (chromsome 21 only)</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2018</publicationYear>
  <dates>
    <date dateType="Issued">2018-02-14</date>
  </dates>
  <resourceType resourceTypeGeneral="JournalArticle"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/1173306</alternateIdentifier>
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  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.1173305</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This is a small subset of the RNA-seq data from a recently published macrophage study (https://doi.org/10.1038/s41588-018-0046-7) intended for quickly testing alignment and quantification methods. The fastq files only contain reads mapping to the chromosome 21 of the human genome.&lt;/p&gt;

&lt;p&gt;The dataset consists of macrophages from two individuals (eipl and fikt) profiled in two conditions:&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;A - naive&lt;/li&gt;
	&lt;li&gt;C - 5 hours after Salmonella infection&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;The data is paired end with 1 and 2 denoting the first and second pair, respectively.&lt;/p&gt;</description>
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