Preview

joineRML-v0.4.1.zip

graemeleehickey-joineRML-4eed18b
- .Rbuildignore 148 Bytes
- .gitignore 60 Bytes
- .travis.yml 591 Bytes
- DESCRIPTION 2.3 kB
- LICENSE 35.1 kB
- NAMESPACE 1.4 kB
- NEWS.md 7.6 kB
- R
  - RcppExports.R 1.1 kB
  - S.R 795 Bytes
  - baseHaz.R 3.8 kB
  - bootSE.R 9.6 kB
  - confint.mjoint.R 5.2 kB
  - convMonitor.R 2.7 kB
  - dynLong.R 9.7 kB
  - dynSurv.R 12.2 kB
  - epileptic.qol.R 3.7 kB
  - fitted.mjoint.R 2.4 kB
  - fixef.mjoint.R 2.7 kB
  - formula.mjoint.R 1.9 kB
  - getVarCov.mjoint.R 1.7 kB
  - heart.valve.R 3.5 kB
  - hessian.R 3.7 kB
  - initsLong.R 2.0 kB
  - initsSurv.R 3.5 kB
  - joineRML.R 1.4 kB
  - logLik.mjoint.R 1.7 kB
  - logpb.R 2.8 kB
  - mjoint.R 33.6 kB
  - mjoint.object.R 5.9 kB
  - mvlme.R 3.3 kB
  - pbc2.R 3.0 kB
  - plot.dynLong.R 4.4 kB
  - plot.dynSurv.R 8.2 kB
  - plot.mjoint.R 2.3 kB
  - plot.ranef.mjoint.R 2.3 kB
  - plotConvergence.R 4.3 kB
  - print.bootSE.R 1.8 kB
  - print.dynLong.R 399 Bytes
  - print.dynSurv.R 566 Bytes
  - print.mjoint.R 2.1 kB
  - print.summary.mjoint.R 4.0 kB
  - process_newdata.R 3.5 kB
  - ranef.mjoint.R 2.1 kB
  - renal.R 3.3 kB
  - residuals.mjoint.R 2.4 kB
  - sampleData.R 3.1 kB
  - sigma.mjoint.R 1.0 kB
  - simData.R 8.2 kB
  - stepEM.R 9.2 kB
  - summary.mjoint.R 4.3 kB
  - thetaDraw.R 1.2 kB
  - vcov.mjoint.R 3.7 kB
- README.Rmd 6.2 kB
- README.md 6.3 kB
- appveyor.yml 836 Bytes
- codecov.yml 15 Bytes
- cran-comments.md 286 Bytes
- data
  - epileptic.qol.rda 11.0 kB
  - heart.valve.rda 29.3 kB
  - pbc2.rda 39.7 kB
  - renal.rda 900.9 kB
- data-raw
  - qol
    - .Rapp.history 147 Bytes
    - epileptic.qol.Rdata 14.7 kB
    - prepare_data.R 1.7 kB
    - qol.csv 53.4 kB
  - renal
    - .Rapp.history 65 Bytes
    - gfr_raw.csv 3.6 MB
    - haem_raw.csv 4.9 MB
    - prepare_data.R 3.9 kB
    - prot_raw.csv 2.2 MB
    - renal.Rdata 1.3 MB
- inst
  - image
    - hex
      - hex.R 823 Bytes
- joineRML.Rproj 432 Bytes
- man
  - .gitignore 14 Bytes
  - baseHaz.Rd 3.2 kB
  - bootSE.Rd 8.4 kB
  - confint.mjoint.Rd 3.6 kB
  - dynLong.Rd 6.9 kB
  - dynSurv.Rd 7.6 kB
  - epileptic.qol.Rd 3.7 kB
  - figures
    - hex.png 113.7 kB
  - fitted.mjoint.Rd 1.4 kB
  - fixef.mjoint.Rd 2.6 kB
  - formula.mjoint.Rd 1.6 kB
  - getVarCov.mjoint.Rd 1.5 kB
  - heart.valve.Rd 3.4 kB
  - joineRML.Rd 1.4 kB
  - logLik.mjoint.Rd 1.7 kB
  - mjoint.Rd 16.2 kB
  - mjoint.object.Rd 5.8 kB
  - pbc2.Rd 2.9 kB
  - plot.dynLong.Rd 2.4 kB
  - plot.dynSurv.Rd 3.5 kB
  - plot.mjoint.Rd 2.1 kB
  - plot.ranef.mjoint.Rd 1.5 kB
  - plotConvergence.Rd 1.6 kB
  - ranef.mjoint.Rd 2.0 kB
  - renal.Rd 3.2 kB
  - residuals.mjoint.Rd 1.3 kB
  - sampleData.Rd 2.0 kB
  - sigma.mjoint.Rd 943 Bytes
  - simData.Rd 5.0 kB
  - summary.mjoint.Rd 2.4 kB
  - vcov.mjoint.Rd 3.1 kB
- src
  - .gitignore 29 Bytes
  - Makevars 111 Bytes
  - Makevars.win 111 Bytes
  - RcppExports.cpp 6.8 kB
  - expW.cpp 780 Bytes
  - gammaUpdate.cpp 4.9 kB
  - gammaUpdate_approx.cpp 2.8 kB
  - init.c 1.5 kB
  - lambdaUpdate.cpp 1.5 kB
  - mvnorm.cpp 972 Bytes
- tests
  - testthat
    - test-ancillary.R 4.6 kB
    - test-boot.R 3.0 kB
    - test-inputs.R 11.9 kB
    - test-models.R 6.4 kB
  - testthat.R 60 Bytes
- vignettes
  - joineRML.Rmd 11.1 kB
  - joineRML_cache
    - html
      - __packages 51 Bytes
      - hvd_model_fit_4c7e505dd19c268aea1f99aee071cc94.RData 3.1 kB
      - hvd_model_fit_4c7e505dd19c268aea1f99aee071cc94.rdb 512.0 kB
      - hvd_model_fit_4c7e505dd19c268aea1f99aee071cc94.rdx 167 Bytes
      - joineRML_99311e8db628fe71216e242a3e88a9eb.RData 3.7 kB
      - joineRML_99311e8db628fe71216e242a3e88a9eb.rdb 373.9 kB
      - joineRML_99311e8db628fe71216e242a3e88a9eb.rdx 170 Bytes
      - joineR_614bf2d80922aa5f35d5dcaffbb8e1c2.RData 3.4 kB
      - joineR_614bf2d80922aa5f35d5dcaffbb8e1c2.rdb 44.9 kB
      - joineR_614bf2d80922aa5f35d5dcaffbb8e1c2.rdx 201 Bytes
  - technical.Rnw 36.1 kB
  - technical.bib 5.5 kB