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CryoEM Maps and Associated Data Submitted to the 2015/2016 EMDataBank Map Challenge

Lawson, Catherine; Chiu, Wah; Carragher, Bridget; Carazo, Jose-Maria; Jiang, Wen; Patwardhan, Ardan; Rubinstein, John; Rosenthal, Peter; Sun, Fei; Vonck, Janet; Bai, Xiaochen; Bell, James; Caputo, Nick; Chakraborty, Arka; Chen, Dong-Hua; Chen, James; Diaz-Avalos, Ruben; Donati, Laurene; Estrozi, Leandro; Galaz Montoya, Jesus; Gati, Cornelius; Gomez-Blanco, Josue; Grigorieff, Nikolaus; Gros, Piet; Heymann, Bernard; Leith, ArDean; Li, Fei; Ludtke, Steven; Nans, Andrea; Nilchian, Masih; Punjabi, Ali; Sixma, Titia; Tegunov, Dimitry; Yang, Kailu; Yu, Guimei; Zhang, Junjie; Sala, Raul


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{
  "DOI": "10.5281/zenodo.1120379", 
  "abstract": "<p>Files and metadata associated with the EMDataBank/Unified Data Resource for 3DEM 2015/2016 Map Challenge hosted at challenges.emdatabank.org are deposited.</p>\n\n<p>All members of the Scientific Community--at all levels of experience--were invited to participate as Challengers, and/or as Assessors.</p>\n\n<p>Seven benchmark raw image datasets were selected for the challenge. Six are selected from recently described single particle structure determinations with image data collected as multi-frame movies; one is based on simulated (in silico) images. All of the raw image datasets are archived at pdbe.org/empiar.</p>\n\n<p>27 Challengers created 66 single particle reconstructions from the targets, and then uploaded their results with associated details.&nbsp; 15 of the reconstructions were calculated using the SDSC Gordon supercomputer.</p>\n\n<p>This map challenge was one of two community-wide challenges sponsored by EMDataBank in 2015/2016 to critically evaluate 3DEM methods that are coming into use, with the ultimate goal of developing validation criteria associated with every 3DEM map and map-derived model.</p>\n\n<p>&nbsp;</p>", 
  "author": [
    {
      "family": "Lawson, Catherine"
    }, 
    {
      "family": "Chiu, Wah"
    }, 
    {
      "family": "Carragher, Bridget"
    }, 
    {
      "family": "Carazo, Jose-Maria"
    }, 
    {
      "family": "Jiang, Wen"
    }, 
    {
      "family": "Patwardhan, Ardan"
    }, 
    {
      "family": "Rubinstein, John"
    }, 
    {
      "family": "Rosenthal, Peter"
    }, 
    {
      "family": "Sun, Fei"
    }, 
    {
      "family": "Vonck, Janet"
    }, 
    {
      "family": "Bai, Xiaochen"
    }, 
    {
      "family": "Bell, James"
    }, 
    {
      "family": "Caputo, Nick"
    }, 
    {
      "family": "Chakraborty, Arka"
    }, 
    {
      "family": "Chen, Dong-Hua"
    }, 
    {
      "family": "Chen, James"
    }, 
    {
      "family": "Diaz-Avalos, Ruben"
    }, 
    {
      "family": "Donati, Laurene"
    }, 
    {
      "family": "Estrozi, Leandro"
    }, 
    {
      "family": "Galaz Montoya, Jesus"
    }, 
    {
      "family": "Gati, Cornelius"
    }, 
    {
      "family": "Gomez-Blanco, Josue"
    }, 
    {
      "family": "Grigorieff, Nikolaus"
    }, 
    {
      "family": "Gros, Piet"
    }, 
    {
      "family": "Heymann, Bernard"
    }, 
    {
      "family": "Leith, ArDean"
    }, 
    {
      "family": "Li, Fei"
    }, 
    {
      "family": "Ludtke, Steven"
    }, 
    {
      "family": "Nans, Andrea"
    }, 
    {
      "family": "Nilchian, Masih"
    }, 
    {
      "family": "Punjabi, Ali"
    }, 
    {
      "family": "Sixma, Titia"
    }, 
    {
      "family": "Tegunov, Dimitry"
    }, 
    {
      "family": "Yang, Kailu"
    }, 
    {
      "family": "Yu, Guimei"
    }, 
    {
      "family": "Zhang, Junjie"
    }, 
    {
      "family": "Sala, Raul"
    }
  ], 
  "id": "1120379", 
  "issued": {
    "date-parts": [
      [
        2017, 
        12, 
        21
      ]
    ]
  }, 
  "language": "eng", 
  "note": "The 2015/2016 Map Challenge was supported by the US National Institutes of Health / National Institute for General Medical Sciences (NIH/NIGMS) Under Grant Number R01 GM079429 to Wah Chiu (PI).  A Directors Award from the UCSD Supercomputer Center provided supercomputer access that was used in 15 of the 66 submitted entries.", 
  "publisher": "Zenodo", 
  "title": "CryoEM Maps and Associated Data Submitted to the 2015/2016 EMDataBank Map Challenge", 
  "type": "dataset", 
  "version": "1"
}
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