Dataset Open Access

Maize grains and maize grain-based diets dataset

Bernillon, Stéphane; Maucourt, Mickaël; Chéreau, Sylvain; Deborde, Catherine; Jacob, Daniel; Priymenko, Nathalie; Laporte, Bérengère; Coumoul, Xavier; Salles, Bernard; Rogowsky, Peter M.; Richard-Forget, Florence; Moing, Annick

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  <identifier identifierType="DOI">10.5281/zenodo.1097409</identifier>
  <creators>
    <creator>
      <creatorName>Bernillon, Stéphane</creatorName>
      <givenName>Stéphane</givenName>
      <familyName>Bernillon</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-4955-0161</nameIdentifier>
      <affiliation>Bordeaux Metabolome Facility, CGFB, MetaboHUB &amp; UMR1332 Biologie du Fruit et Pathologie, INRA, Univ. Bordeaux, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Maucourt, Mickaël</creatorName>
      <givenName>Mickaël</givenName>
      <familyName>Maucourt</familyName>
      <affiliation>Bordeaux Metabolome Facility, CGFB, MetaboHUB &amp; UMR1332 Biologie du Fruit et Pathologie, INRA, Univ. Bordeaux, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Chéreau, Sylvain</creatorName>
      <givenName>Sylvain</givenName>
      <familyName>Chéreau</familyName>
      <affiliation>UR MycSA, INRA, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Deborde, Catherine</creatorName>
      <givenName>Catherine</givenName>
      <familyName>Deborde</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-5687-9059</nameIdentifier>
      <affiliation>Bordeaux Metabolome Facility, CGFB, MetaboHUB &amp; UMR1332 Biologie du Fruit et Pathologie, INRA, Univ. Bordeaux, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Jacob, Daniel</creatorName>
      <givenName>Daniel</givenName>
      <familyName>Jacob</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-6687-7169</nameIdentifier>
      <affiliation>Bordeaux Metabolome Facility, CGFB, MetaboHUB &amp; UMR1332 Biologie du Fruit et Pathologie, INRA, Univ. Bordeaux, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Priymenko, Nathalie</creatorName>
      <givenName>Nathalie</givenName>
      <familyName>Priymenko</familyName>
      <affiliation>Toxalim (Research Centre in Food Toxicology), Université de Toulouse, INRA, ENVT, INP-Purpan, UPS, 31000 Toulouse, France</affiliation>
    </creator>
    <creator>
      <creatorName>Laporte, Bérengère</creatorName>
      <givenName>Bérengère</givenName>
      <familyName>Laporte</familyName>
      <affiliation>Toxalim (Research Centre in Food Toxicology), Université de Toulouse, INRA, ENVT, INP-Purpan, UPS, 31000 Toulouse, France</affiliation>
    </creator>
    <creator>
      <creatorName>Coumoul, Xavier</creatorName>
      <givenName>Xavier</givenName>
      <familyName>Coumoul</familyName>
      <affiliation>UMRS1124, Toxicologie, Pharmacologie et Signalisation cellulaire, INSERM, Univ. Paris Descartes, 75000 Paris, France</affiliation>
    </creator>
    <creator>
      <creatorName>Salles, Bernard</creatorName>
      <givenName>Bernard</givenName>
      <familyName>Salles</familyName>
      <affiliation>Toxalim (Research Centre in Food Toxicology), Université de Toulouse, INRA, ENVT, INP-Purpan, UPS, 31000 Toulouse, France</affiliation>
    </creator>
    <creator>
      <creatorName>Rogowsky, Peter M.</creatorName>
      <givenName>Peter M.</givenName>
      <familyName>Rogowsky</familyName>
      <affiliation>Laboratoire Reproduction et Développement des Plantes, Univ. Lyon, ENS de Lyon, UCB Lyon 1 CNRS, INRA, 69000 Lyon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Richard-Forget, Florence</creatorName>
      <givenName>Florence</givenName>
      <familyName>Richard-Forget</familyName>
      <affiliation>UR MycSA, INRA, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
    <creator>
      <creatorName>Moing, Annick</creatorName>
      <givenName>Annick</givenName>
      <familyName>Moing</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-1144-3600</nameIdentifier>
      <affiliation>Bordeaux Metabolome Facility, CGFB, MetaboHUB &amp; UMR1332 Biologie du Fruit et Pathologie, INRA, Univ. Bordeaux, Centre INRA de Nouvelle Aquitaine - Bordeaux, 71 av Edouard Bourlaux, 33140 Villenave d'Ornon, France</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Maize grains and maize grain-based diets dataset</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2017</publicationYear>
  <subjects>
    <subject>1H-NMR</subject>
    <subject>liquid chromatography mass spectrometry</subject>
    <subject>maize</subject>
    <subject>grains</subject>
    <subject>maize-grain based diet</subject>
    <subject>glyphosate</subject>
    <subject>metabolomics</subject>
    <subject>LC-QTOFMS</subject>
    <subject>GMO</subject>
    <subject>composition</subject>
    <subject>rat diet</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2017-12-08</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/1097409</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsCitedBy">10.1007/s11306-018-1329-9</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.1097408</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/inra</relatedIdentifier>
  </relatedIdentifiers>
  <version>1.0.0</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by-nc/4.0/legalcode">Creative Commons Attribution Non Commercial 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;The MS and NMR datasets is composed of:&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;a ReadMe file&amp;nbsp;&lt;/li&gt;
	&lt;li&gt;one Excel file named &amp;quot;Sample Rosetta Stone&amp;quot; containing the MS and NMR dataset sample description,&lt;/li&gt;
	&lt;li&gt;the MS dataset:&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;- a &amp;quot;Grains&amp;quot; directory containing LCMS raw files in mzML format. They are organized according to the following groups: Blank, MON810_I_woR, MON810_T_woR, Nk603_I_woR, Nk603_T_woR, Nk603_T_wR and QC,&lt;/p&gt;

&lt;p&gt;- a &amp;quot;Pellets&amp;quot; directory containing LCMS raw files in mzML format. They are organized according to the following groups: Blank, QC and T0-1 to T0-9,&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;the NMR dataset:&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;- 21 NMR spectra directories (containing &lt;sup&gt;1&lt;/sup&gt;H single-pulse (zg) NMR spectrum for each maize grain extract sample and 1 directory GMO-11-2D containing 2D (COSY and HSQC) spectra for &amp;ldquo;NK603 transgenic without roundup&amp;rdquo; extract sample) in Bruker format,&lt;/p&gt;

&lt;p&gt;- 18 NMR spectra directories (containing &lt;sup&gt;1&lt;/sup&gt;H single-pulse (zg) NMR spectrum and &lt;sup&gt;1&lt;/sup&gt;H CPMG spectrum for each pellet extract sample) in Bruker format.&lt;/p&gt;</description>
    <description descriptionType="Other">Funding:
French Ministry of Ecological and Solidarity Transition (GMO90+ project of the RiskOGM program)
MetaboHUB (ANR-11-INBS-0010)
PHENOME (ANR-11-INBS-0012)</description>
  </descriptions>
</resource>
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December 8, 2017
DOI:
10.5281/zenodo.1097409

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Keyword(s):
1H-NMR liquid chromatography mass spectrometry maize grains maize-grain based diet glyphosate metabolomics LC-QTOFMS GMO composition rat diet
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