Dataset Open Access

IBNWB Template Brain

Manton, James D.; Jefferis, Gregory S.X.E.

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  "description": "<p>An extended, whole-brain version of the original&nbsp;IBN template brain made available from:</p>\n\n<p><strong>A Systematic Nomenclature for the Insect Brain</strong><br />\nKei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong, George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang R&ouml;ssler, Julie H. Simpson, Nicholas J. Strausfeld, Roland Strauss, Leslie B. Vosshall, Insect Brain Name Working Group<br />\n</p>\n\n<p>The green channel (n-syb-GFP) of the tricolour confocal data provided was taken, duplicated and flipped about the medio-lateral axis using Fiji. The Fiji plugin &#39;Pairwise stitching&#39; was used to stitch the two stacks together with an offset of 392 pixels. This offset was chosen by eye as the one from the range of offsets 385&ndash;400 pixels that produced the most anatomically correct result. The overlapping region&#39;s intensity was set using the &#39;linear blend&#39; method.</p>", 
  "license": "", 
  "creator": [
      "affiliation": "MRC LMB", 
      "@type": "Person", 
      "name": "Manton, James D."
      "affiliation": "MRC LMB", 
      "@type": "Person", 
      "name": "Jefferis, Gregory S.X.E."
  "url": "", 
  "datePublished": "2014-06-18", 
  "keywords": [
  "@context": "", 
  "distribution": [
      "contentUrl": "", 
      "encodingFormat": "nrrd", 
      "@type": "DataDownload"
  "identifier": "", 
  "@id": "", 
  "@type": "Dataset", 
  "name": "IBNWB Template Brain"
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