Dataset Open Access

IBNWB Template Brain

Manton, James D.; Jefferis, Gregory S.X.E.


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  <identifier identifierType="DOI">10.5281/zenodo.10569</identifier>
  <creators>
    <creator>
      <creatorName>Manton, James D.</creatorName>
      <givenName>James D.</givenName>
      <familyName>Manton</familyName>
      <affiliation>MRC LMB</affiliation>
    </creator>
    <creator>
      <creatorName>Jefferis, Gregory S.X.E.</creatorName>
      <givenName>Gregory S.X.E.</givenName>
      <familyName>Jefferis</familyName>
      <affiliation>MRC LMB</affiliation>
    </creator>
  </creators>
  <titles>
    <title>IBNWB Template Brain</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2014</publicationYear>
  <subjects>
    <subject>drosophila</subject>
    <subject>neuroanatomy</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2014-06-18</date>
  </dates>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/10569</alternateIdentifier>
  </alternateIdentifiers>
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    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/zenodo</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/drosophila</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by-sa/4.0/legalcode">Creative Commons Attribution Share Alike 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;An extended, whole-brain version of the original&amp;nbsp;IBN template brain made available from:&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;A Systematic Nomenclature for the Insect Brain&lt;/strong&gt;&lt;br /&gt;
Kei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong, George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang R&amp;ouml;ssler, Julie H. Simpson, Nicholas J. Strausfeld, Roland Strauss, Leslie B. Vosshall, Insect Brain Name Working Group&lt;br /&gt;
http://dx.doi.org/10.1016/j.neuron.2013.12.017&lt;/p&gt;

&lt;p&gt;The green channel (n-syb-GFP) of the tricolour confocal data provided was taken, duplicated and flipped about the medio-lateral axis using Fiji. The Fiji plugin &amp;#39;Pairwise stitching&amp;#39; was used to stitch the two stacks together with an offset of 392 pixels. This offset was chosen by eye as the one from the range of offsets 385&amp;ndash;400 pixels that produced the most anatomically correct result. The overlapping region&amp;#39;s intensity was set using the &amp;#39;linear blend&amp;#39; method.&lt;/p&gt;</description>
  </descriptions>
</resource>
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