Dataset Open Access

IBNWB Template Brain

Manton, James D.; Jefferis, Gregory S.X.E.

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  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.10569", 
  "author": [
      "given": "James D.", 
      "family": "Manton"
      "given": "Gregory S.X.E.", 
      "family": "Jefferis"
  "issued": {
    "date-parts": [
  "abstract": "<p>An extended, whole-brain version of the original&nbsp;IBN template brain made available from:</p>\n\n<p><strong>A Systematic Nomenclature for the Insect Brain</strong><br />\nKei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong, George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang R&ouml;ssler, Julie H. Simpson, Nicholas J. Strausfeld, Roland Strauss, Leslie B. Vosshall, Insect Brain Name Working Group<br />\n</p>\n\n<p>The green channel (n-syb-GFP) of the tricolour confocal data provided was taken, duplicated and flipped about the medio-lateral axis using Fiji. The Fiji plugin &#39;Pairwise stitching&#39; was used to stitch the two stacks together with an offset of 392 pixels. This offset was chosen by eye as the one from the range of offsets 385&ndash;400 pixels that produced the most anatomically correct result. The overlapping region&#39;s intensity was set using the &#39;linear blend&#39; method.</p>", 
  "title": "IBNWB Template Brain", 
  "type": "dataset", 
  "id": "10569"
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