Video/Audio Open Access
Capillary networks and follicular marginal zones in the human spleen. Three-dimensional models based on immunostained serial sections - Supplementary videos
Lobachev, Oleg;
Steiniger, Birte S.
DCAT Export
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<dct:title>Capillary networks and follicular marginal zones in the human spleen. Three-dimensional models based on immunostained serial sections - Supplementary videos</dct:title>
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<dcat:keyword>human spleen</dcat:keyword>
<dcat:keyword>3D reconstruction</dcat:keyword>
<dcat:keyword>immunohistology</dcat:keyword>
<dcat:keyword>capillary networks</dcat:keyword>
<dcat:keyword>white pulp</dcat:keyword>
<dcat:keyword>marginal zone</dcat:keyword>
<dcat:keyword>follicle</dcat:keyword>
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<dct:description><p>We regard ROIs, regions of interest, from a human spleen specimen in single (four ROIs)&nbsp;and double (three ROIs) staining. The ROIs with the same number correspond to each other. Below we map references in manuscript (<strong>bold</strong>) to file names in this repository (<em>italics</em>).</p> <ul> <li>File <em>colour-deconvolution.png</em>&nbsp;&ndash;&nbsp;settings of colour deconvolution in Fiji for double staining.</li> <li>File <em>comments to videos.odt</em>&nbsp;&ndash;&nbsp;a commentary to S3[c,d] Video.</li> <li><strong>S1a,b Video to S3a,b Video</strong>: files <em>video_[1,2,3][a,b].mov</em>&nbsp;&ndash;&nbsp;sequence of section with single (a) and double (b) staining for ROI 1 to 3&nbsp;in the main text.</li> <li><strong>S1c Video to S3c Video</strong>: files <em>video_[1,2,3]c.mov</em>&nbsp;&ndash;&nbsp;video of the reconstruction, single staining, special blood vessels highlighted.</li> <li><strong>S1d Video to S4d Video</strong>: files <em>video_[1,2,3]d.mov</em>&nbsp;&ndash;&nbsp;an overview video of the reconstruction, double staining.</li> <li><strong>S4 Video</strong>: file <em>video_4.mov</em>&nbsp;&ndash;&nbsp;quality control in virtual reality.</li> <li><strong>S1 Figure</strong>: a supplementary figure&nbsp;<em>fig_S1.tiff</em>&nbsp; and its caption <em>fig_S1_legend.odt</em></li> <li><strong>S2&nbsp;Figure</strong>: a supplementary figure&nbsp;<em>fig_S2.tiff</em>&nbsp; and its caption <em>fig_S2_legend.odt</em></li> </ul> <p>This data corresponds to the&nbsp;publication &quot;Capillary networks and follicular marginal zones in the human spleen. Three-dimensional models based on immunostained serial sections&quot; by B. S. Steiniger, C. Ulrich, M. Berthold, M. Guthe, and O. Lobachev, 2017.</p></dct:description>
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| Data volume | 5.0 GB | 3.0 GB |
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Indexed in
- Publication date:
- July 20, 2017
- DOI:
-
- Keyword(s):
- human spleen 3D reconstruction immunohistology capillary networks white pulp marginal zone follicle 3D virtual reality
- Published in:
- PLOS ONE: 13 pp. e0191019 (2).
- Related identifiers:
- Supplement to
- License (for files):
- Creative Commons Attribution Share Alike 4.0 International