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cerebis/sim3C: Small update to deal with IUPAC ambiguity codes.

Matthew DeMaere; Aaron Darling

Modelling of base calling errors within Art.py does not currently support ambiguous symbols besides N.

This release adds the following support:

  • informative error reporting when reference sequences contains symbols other than ACGTN.
  • new command line option --convert filters references in memory, converting unsupported symbols to N.
  • --simple-reads option does not model errors and can handle all symbols.

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cerebis/sim3C-0.1.1.zip
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