2024-03-28T16:50:14Z
https://zenodo.org/oai2d
oai:zenodo.org:1187120
2020-01-24T19:27:14Z
user-tripal
software
Bradford Condon
Abdullah Almsaeed
2018-03-02
<p>Tripal Alchemist is an entity converter for <a href="http://tripal.info/">Tripal</a>, the Drupal-based biological database toolkit. Alchemist makes it easy to remap the content in your site to different bundles.</p>
<ul>
<li>Transform Tripal entities from one type to another based on their existing bundle-defining property</li>
<li>Manually override entity properties and transform select elements</li>
<li>Trying to convert a large but specific subset of entities? Create a collection, then convert the entities in that collection</li>
</ul>
https://doi.org/10.5281/zenodo.1187120
oai:zenodo.org:1187120
Zenodo
https://github.com/statonlab/tripal_alchemist/tree/1.0
https://zenodo.org/communities/tripal
https://doi.org/10.5281/zenodo.1187119
info:eu-repo/semantics/openAccess
Other (Open)
statonlab/tripal_alchemist: Tripal Alchemist v1.0 Release
info:eu-repo/semantics/other
oai:zenodo.org:3380529
2020-01-24T19:27:58Z
user-tripal
software
Sean Buehler
Jill Wegrzyn
2019-07-28
<p>This module supports sequence similarity search on a Tripal website through a new dual application option. The Tripal module provides access to the speed increase available through Diamond for BLASTP/BLASTX style searches as well as traditional NCBI BLAST for BLASTN. Both applications are integrated into a single interface that provides file upload or copy/paste sequence support for the query and access to formatted databases for NCBI BLAST or Diamond. The target databases can be customized for the categories of whole genome, gene, protein, and transcriptome/unigene. The administration interface allows the admin user to set what pre-indexed databases are available (which show up in a dropdown menu). The module supports execution of the searches on a remote machine so that the search is not running directly on the limited resources typically associated with web servers</p>
https://doi.org/10.5281/zenodo.3380529
oai:zenodo.org:3380529
eng
Zenodo
https://zenodo.org/communities/tripal
https://doi.org/10.5281/zenodo.3380528
info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
Tripal Sequence Similarity Search
info:eu-repo/semantics/other