Published April 24, 2018 | Version v1.1.0
Software Open

shaunpwilkinson/aphid: aphid v1.1.0

Creators

  • 1. Victoria University of Wellington

Description

aphid 1.1.0

  • Added posterior probabilities for PHMMs.

  • derivePHMM.list seed selection changed from max length to most common length.

  • Fixed issue in 'align' causing distance matrix error if seqweights not set to NULL (thanks to Ben Margetts for bug report).

  • Updated dependency list to include kmer instead of phylogram.

Files

shaunpwilkinson/aphid-v1.1.0.zip

Files (255.4 kB)

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Additional details

Related works

Is supplement to
https://github.com/shaunpwilkinson/aphid/tree/v1.1.0 (URL)