epinowcast/epinowcast: Epinowcast 0.2.2
Creators
- 1. @epiforecasts @cmmid
- 2. ETH Zürich
- 3. London School of Hygiene & Tropical Medicine
- 4. data.org
- 5. University of Turin
- 6. London School of Hygiene and Tropical Medicine
Description
This is a minor release that fixes a bug in the handling of optional initial conditions that was introduced by a recent change in cmdstan 2.32.1
. Upgrading is recommended for all users who wish to use versions of cmdstan
beyond 2.32.0
. In addition to fixing this issue, the release also includes some minor documentation and vignette improvements, along with enhancements in input checking.
@sbfnk and @seabbs contributed code to this release.
@seabbs reviewed pull requests for this release.
@sbfnk and @seabbs reported bugs reported bugs, made suggestions, or contributed to discussions that led to improvements in this release.
Bugs- Improved the handling of optional initial conditions so that they are consistently passed as arrays to stan as required by
cmdstan 2.32.1
. This fix is required in order to use versions ofcmdstan
beyond2.32.0
. See #276 by @seabbs and self-reviewed.
- Added input checking for
max_delay
inenw_preprocess_data()
to ensure that the maximum delay is greater than or equal to 1 and that it can be coerced to be an integer. See #274 by @sbfnk and reviewed by @seabbs.
- Improved the discrete delay distributions vignette including escaping functions to improve readibility and right-closing discretised bins. See #275 by @sbfnk and reviewed by @seabbs.
- Improved the documentation for
max_delay
inenw_preprocess_data()
and fixed a typo in the same documentation. See #274 by @sbfnk and reviewed by @seabbs.
- Issue 273: Use array syntax for initial conditions in order to work with cmdstan 2.32.1 by @seabbs in https://github.com/epinowcast/epinowcast/pull/276
- Issue 278: minor improvements to the discrete delay distributions vignette by @sbfnk in https://github.com/epinowcast/epinowcast/pull/275
- Issue 279: Improved enw_preprocess_data documentation and input checking by @sbfnk in https://github.com/epinowcast/epinowcast/pull/274
- 0.2.2 release by @seabbs in https://github.com/epinowcast/epinowcast/pull/280
Full Changelog: https://github.com/epinowcast/epinowcast/compare/v0.2.1...v0.2.2
Files
epinowcast/epinowcast-v0.2.2.zip
Files
(11.5 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/epinowcast/epinowcast/tree/v0.2.2 (URL)