Published February 13, 2023
| Version scATAC-pro_v1.5.1
Software
Open
wbaopaul/scATAC-pro: scATAC-pro_v1.5.1
Creators
- 1. University of Pennsylvania & Children's Hospital of Philadelphia
- 2. MD Anderson Cancer Center
Description
- integrate module takes SampleSheet.csv file as input, where sample names, paths of peaks, fragments, and cell barcodes can be specified
- Enable 4/5 bp shift for each read by setting SHIFT_READS_IN_BAM as TRUE in configure_user.txt file
- Correctted an error for processing single-end sequencing data in the mapping module
Files
wbaopaul/scATAC-pro-scATAC-pro_v1.5.1.zip
Files
(15.9 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:531f69d183e6a1a5b3d226aba02cab5e
|
15.9 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/wbaopaul/scATAC-pro/tree/scATAC-pro_v1.5.1 (URL)