Published April 7, 2024
| Version v1.6.0
Software
Open
navis-org/navis: Version 1.6.0
Creators
- 1. University of Cambridge
- 2. AdInMo
- 3. University of Cambridge & MRC LMB
- 4. Charité Universitätsmedizin Berlin
- 5. VirtualFlyBrain.org
- 6. Janelia
- 7. Allen Institute
- 8. VIB-KU Leuven
Description
It has been a long time (7 months, to be precise) since the last release but we've not been idle!
Version 1.6.0
is chock-full with new features, improvements and fixes. Here are some of the highlights:
Breaking
- with this release we've dropped support for Python 3.8 as per NEP 29
navis.write_swc
no longer writesDotprops
New Features
navis.read_parquet
andnavis.write_parquet
let you read/write large set of skeletons or dotprops; note: these are experimental and the format specs might still change but feel free to take it for a spin- new
navis.NeuronConnector
class for creating connectivity graphs from groups of neurons with consistent connector IDs (e.g. frompymaid
neurons)
Improvements
- improved logic for splitting NBLASTs across multiple cores
- i/o functions can now read directly from
.tar
or.tar.gz
files (.zip
was already supported)
Fixes
- fixes to the neuPrint interface by @stuarteberg
- plotting empty TreeNeurons no longer breaks things thanks to @floesche
- reading large files (i.e. mostly meshes) directly from a URL should not break anymore
New Contributors
- @stuarteberg made their first contribution in https://github.com/navis-org/navis/pull/124
- @floesche made their first contribution in https://github.com/navis-org/navis/pull/125
Full Changelog: https://navis.readthedocs.io/en/latest/source/whats_new.html Commit history: https://github.com/navis-org/navis/compare/v1.5.0...v1.6.0
Files
navis-org/navis-v1.1.0.zip
Files
(215.4 MB)
Name | Size | Download all |
---|---|---|
md5:818407d383c03923ae68735954d99b4a
|
105.4 MB | Preview Download |
md5:19e53e448a7e65c8676e170cfa3ea94d
|
110.0 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/navis-org/navis/tree/v1.6.0 (URL)