Published April 10, 2024 | Version 3.0.2
Software Open

nf-core/rnafusion: 3.0.2

Creators

  • 1. Scilifelab
  • 2. @seqeralabs
  • 3. Boehringer Ingelheim
  • 4. Karolinka Institute
  • 5. University College London & The Francis Crick Institute
  • 6. @CenterForMedicalGeneticsGhent
  • 7. St. Vincent's University Hospital
  • 8. Clinical Genomics
  • 9. Qatar Foundation
  • 10. DER SPIEGEL
  • 11. @IMPIMBA @ZuberLab @ObenaufLab
  • 12. Gustave Roussy
  • 13. Robert Bosch GmbH

Description

Bug fixes.

Changelog:

Changed

  • Update to nf-tools 2.11.1 [https://github.com/nf-core/rnafusion/pull/457] (#457)
  • Update picard collectrnaseqmetrics memory requirements to 0.8x what is provided https://github.com/nf-core/rnafusion/pull/474

Fixed

  • fix bug when using parameter "whitelist" https://github.com/nf-core/rnafusion/pull/466
  • fix VCF_COLLECT handling when a tool is absent from FUSIONREPORT report https://github.com/nf-core/rnafusion/pull/458
  • fix VCF_COLLECT when fusioninspector output is empty but fusionreport is not https://github.com/nf-core/rnafusion/pull/465
  • fix VCF_COLLECT bug https://github.com/nf-core/rnafusion/pull/481
  • fix conda package for starfusion/detecthttps://github.com/nf-core/rnafusion/pull/482
  • fix logical gate so when stringtie should run but not starfusion, starfusion will not runhttps://github.com/nf-core/rnafusion/pull/482

Files

nf-core/rnafusion-3.0.2.zip

Files (861.0 kB)

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md5:7642153a7ea98c2bcc4ebb20747c23f9
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/rnafusion/tree/3.0.2 (URL)