Published December 5, 2023 | Version v2023-12-05
Software Open

obophenotype/cell-ontology: v2023-12-05

Creators

  • 1. Lawrence Berkeley National Laboratory
  • 2. Critical Path Institute
  • 3. EBI-EMBL
  • 4. semanticly Ltd
  • 5. www.virtualflybrain.org
  • 6. University of Cambridge
  • 7. EMBL-EBI
  • 8. University at Buffalo
  • 9. University of São Paulo
  • 10. Oregon Health and Science University
  • 11. Northeastern University
  • 12. Agilent Technologies
  • 13. @northeastern
  • 14. @RENCI

Description

v2023-10-19

Detailed differences for this release can be viewed at https://github.com/obophenotype/cell-ontology/blob/286560fd1a9f672bc44ae1846fc2f136c986bee9/src/ontology/diffs/cl-diff.md

What's Changed

  • Addresses #1149 obsolete 'barrier epithelial cell' and 'seminal flui… in https://github.com/obophenotype/cell-ontology/pull/2206
  • Add slim coverage check running on local (branch) copy CL by @ubyndr in https://github.com/obophenotype/cell-ontology/pull/2182
  • Fixes #2212 class hierarchy 'peritubular capillary endothelial cell' by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2213
  • Fixes #2209 relabel fat cell by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2210
  • Adding ontobot-change-agent to create PRs based on appropriate Issues. by @hrshdhgd in https://github.com/obophenotype/cell-ontology/pull/2211
  • Update README.md by @dosumis in https://github.com/obophenotype/cell-ontology/pull/2215
  • Fixes #1266 populate mononuclear phagocyte by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2208
  • Addresses #2219 Revise logical definition for 'kidney collecting duct… in https://github.com/obophenotype/cell-ontology/pull/2220
  • Uncommented crucial line in ontobot.yml by @hrshdhgd in https://github.com/obophenotype/cell-ontology/pull/2226
  • Addresses #2203 [NTR-cxg] 'L5/6 near-projecting glutamatergic neuron' in https://github.com/obophenotype/cell-ontology/pull/2222
  • Update README.md by @dosumis in https://github.com/obophenotype/cell-ontology/pull/2218
  • Addresses #2224 Edit 'epithelial cell of lacrimal duct' in https://github.com/obophenotype/cell-ontology/pull/2229
  • Addresses #2030 Make kidney subset in https://github.com/obophenotype/cell-ontology/pull/2230
  • Check for the phrase Hey ontobot before running the workflow by @hrshdhgd in https://github.com/obophenotype/cell-ontology/pull/2228
  • File clean up fix for generic_coverage.py by @ubyndr in https://github.com/obophenotype/cell-ontology/pull/2223
  • Update inadvertently added contributor annotations in https://github.com/obophenotype/cell-ontology/pull/2232
  • Addresses #2202 NTR 'L6 IT Car3 glutamatergic neuron' in https://github.com/obophenotype/cell-ontology/pull/2234
  • Fix duplicated cross-references. by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/2236
  • add new term 'mesenchymal stem cell of apical papilla by @paulacalipho in https://github.com/obophenotype/cell-ontology/pull/2214
  • Refresh imports in preparation for CL release by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2237
  • CL release 2023-12-05 by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2238

New Contributors

  • @hrshdhgd made their first contribution in https://github.com/obophenotype/cell-ontology/pull/2211

Full Changelog: https://github.com/obophenotype/cell-ontology/compare/v2023-10-19...v2023-12-05

Files

obophenotype/cell-ontology-v2023-12-05.zip

Files (23.7 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/obophenotype/cell-ontology/tree/v2023-12-05 (URL)