Number_of_reads_in_clusters	137859					
Number_of_clusters	23318					
Number_of_superclusters	23311					
Number_of_singlets	195475					
Number_of_analyzed_reads	333334					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	2	3546	3546	All	Other	All
2	4	3227	3227	All	Other	All
3	1	3076	3076	All	Other	All
4	1	2801	2801	All	Other	All
5	5	2598	2598	All	Other	All
6	3	2080	2080	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
7	6	1897	1897	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
8	7	1497	1497	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
9	9	1475	1475	All	Other	All
10	3	1431	1431	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
11	10	1230	1230	All	Other	All
12	11	967	967	All	Other	All
13	12	962	962	All	Other	All
14	13	951	951	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Putative LTR elements	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
15	14	943	943	All/organelle/mitochondria	Other	All/organelle/mitochondria
16	15	907	907	All	Other	All
17	16	878	878	All	Other	All
18	17	823	823	All	Other	All
19	18	782	782	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
20	8	717	717	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
21	19	710	710	All	Other	All
22	20	671	671	All	Other	All
23	21	658	658	All	Other	All
24	22	596	596	All	Other	All
25	8	593	593	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
26	23	570	570	All	Other	All
27	24	564	564	All/organelle/mitochondria	Other	All/organelle/mitochondria
28	25	548	548	All	Other	All
29	26	537	537	All	Other	All
30	27	522	522	All	Other	All
31	28	519	519	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
32	29	516	516	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
33	30	501	501	All/organelle/mitochondria	Other	All/organelle/mitochondria
34	31	436	436	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
35	32	430	430	All	Other	All
36	33	428	428	All	Other	All
37	34	424	424	All	Other	All
38	35	417	417	All	Other	All
39	8	409	409	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
40	36	399	399	All	Other	All
41	37	390	390	All	Other	All
42	38	387	387	All	Other	All
43	40	380	380	All	Other	All
44	41	369	369	All	Other	All
45	7	363	363	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
46	42	360	360	All	Other	All
47	43	360	360	All	Other	All
48	44	350	350	All	Other	All
49	45	345	345	All	Other	All
50	46	334	334	All	Other	All
51	47	332	332	All	Other	All
52	48	329	329	All	Other	All
53	49	328	328	All	Other	All
54	50	325	325	All	Other	All
55	51	322	322	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
56	52	318	318	All	Other	All
57	53	314	314	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
58	54	309	309	All	Other	All
59	55	305	305	All	Other	All
60	56	300	300	All	Other	All
61	57	296	296	All	Other	All
62	58	295	295	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
63	59	294	294	All	Other	All
64	61	286	286	All	Other	All
65	62	285	285	All	Other	All
66	63	283	283	All	Other	All
67	64	277	277	All	Other	All
68	65	277	277	All	Other	All
69	66	276	276	All	Other	All
70	67	274	274	All	Other	All
71	68	273	273	All	Other	All
72	69	267	267	All	Other	All
73	70	249	249	All	Other	All
74	71	239	239	All	Other	All
75	72	233	233	All	Other	All
76	73	230	230	All	Other	All
77	74	230	230	All	Other	All
78	75	227	227	All	Other	All
79	76	227	227	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
80	77	225	225	All	Other	All
81	78	222	222	All	Other	All
82	79	220	220	All	Other	All
83	80	216	216	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
84	81	212	212	All	Other	All
85	82	211	211	All	Other	All
86	83	209	209	All	Other	All
87	84	207	207	All	Other	All
88	85	207	207	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
89	39	196	196	All	Other	All
90	86	194	194	All	Other	All
91	87	193	193	All	Other	All
92	88	192	192	All	Other	All
93	89	189	189	All	Other	All
94	90	189	189	All	Other	All
95	91	188	188	All	Other	All
96	39	187	187	All	Other	All
97	92	185	185	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
98	93	183	183	All	Other	All
99	94	181	181	All	Other	All
100	95	176	176	All	Other	All
101	96	175	175	All	Other	All
102	97	174	174	All	Other	All
103	98	171	171	All	Other	All
104	99	171	171	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
105	100	171	171	All	Other	All
106	101	169	169	All	Other	All
107	102	168	168	All	Other	All
108	103	167	167	All	Other	All
109	104	163	163	All	Other	All
110	105	161	161	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
111	106	159	159	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
112	60	158	158	All	Other	All
113	107	157	157	All	Other	All
114	108	156	156	All	Other	All
115	109	155	155	All	Other	All
116	110	154	154	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
117	111	153	153	All	Other	All
118	112	150	150	All	Other	All
119	113	147	147	All	Other	All
120	114	147	147	All	Other	All
121	115	147	147	All	Other	All
122	116	142	142	All	Other	All
123	117	141	141	All	Other	All
124	118	141	141	All	Other	All
125	119	141	141	All	Other	All
126	120	139	139	All	Other	All
127	121	139	139	All	Other	All
128	122	137	137	All	Other	All
129	60	133	133	All	Other	All
130	123	133	133	All	Other	All
131	124	132	132	All	Other	All
132	125	131	131	All	Other	All
133	126	130	130	All	Other	All
134	127	128	128	All	Other	All
135	128	128	128	All	Other	All
136	129	127	127	All	Other	All
137	130	124	124	All	Other	All
138	131	123	123	All	Other	All
139	132	121	121	All	Other	All
140	133	118	118	All	Other	All
141	134	116	116	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
142	135	116	116	All	Other	All
143	136	114	114	All	Other	All
144	137	113	113	All	Other	All
145	138	112	112	All	Other	All
146	139	111	111	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
147	140	111	111	All	Other	All
148	141	111	111	All	Other	All
149	142	111	111	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
150	143	109	109	All	Other	All
151	144	106	106	All	Other	All
152	145	104	104	All	Other	All
153	146	104	104	All	Other	All
154	147	103	103	All	Other	All
155	148	102	102	All	Other	All
156	149	102	102	All	Other	All
157	150	102	102	All	Other	All
158	151	102	102	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
159	152	100	100	All	Other	All
160	153	100	100	All	Other	All
161	154	99	99	All	Other	All
162	155	98	98	All	Other	All
163	156	94	94	All/repeat/rDNA/45S_rDNA/18S_rDNA	Other	All/repeat/rDNA/45S_rDNA/18S_rDNA
164	157	93	93	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
165	158	92	92	All	Other	All
166	159	91	91	All	Other	All
167	160	91	91	All	Other	All
168	161	90	90	All	Other	All
169	162	90	90	All	Other	All
170	163	90	90	All	Other	All
171	164	89	89	All	Other	All
172	165	88	88	All	Other	All
173	166	88	88	All	Other	All
174	167	88	88	All	Other	All
175	168	88	88	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
176	169	87	87	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
177	170	87	87	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
178	171	84	84	All	Other	All
179	172	84	84	All	Other	All
180	173	83	83	All	Other	All
181	174	82	82	All	Other	All
182	175	82	82	All	Other	All
183	176	81	81	All	Other	All
184	177	81	81	All	Other	All
185	178	80	80	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
186	179	80	80	All	Other	All
187	180	79	79	All	Other	All
188	181	78	78	All	Other	All
189	182	77	77	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
190	183	76	76	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
191	184	75	75	All	Other	All
192	185	74	74	All	Other	All
193	186	73	73	All	Other	All
194	187	73	73	All	Other	All
195	188	72	72	All	Other	All
196	189	72	72	All	Other	All
197	190	71	71	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
198	191	71	71	All	Other	All
199	192	70	70	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
200	193	70	70	All	Other	All
201	194	70	70	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
202	195	67	67	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
203	196	66	66	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
204	197	65	65	All	Other	All
205	198	65	65	All	Other	All
206	199	65	65	All	Other	All
207	200	63	63	All	Other	All
208	201	62	62	All	Other	All
209	202	62	62	All	Other	All
210	203	61	61	All	Other	All
211	204	60	60	All	Other	All
212	205	60	60	All	Other	All
213	206	60	60	All	Other	All
214	207	60	60	All	Other	All
215	208	60	60	All	Other	All
216	209	59	59	All	Other	All
217	210	59	59	All	Other	All
218	211	59	59	All	Other	All
219	212	58	58	All	Other	All
220	213	57	57	All	Other	All
221	214	57	57	All	Other	All
222	215	57	57	All	Other	All
223	216	57	57	All	Other	All
224	217	55	55	All	Other	All
225	218	55	55	All	Other	All
226	219	55	55	All	Other	All
227	220	53	53	All	Other	All
228	221	53	53	All	Other	All
229	222	52	52	All	Other	All
230	223	51	51	All	Other	All
231	224	51	51	All	Other	All
232	225	51	51	All	Other	All
233	226	51	51	All	Other	All
234	227	50	50	All	Other	All
235	228	50	50	All	Other	All
236	229	49	49	All	Other	All
237	230	49	49	All	Other	All
238	231	49	49	All	Other	All
239	232	49	49	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
240	233	48	48	All	Other	All
241	234	48	48	All	Other	All
242	235	47	47	All	Other	All
243	236	47	47	All	Other	All
244	237	47	47	All	Other	All
245	238	47	47	All	Other	All
246	239	47	47	All	Other	All
247	240	46	46	All	Other	All
248	241	46	46	All	Other	All
249	242	45	45	All	Other	All
250	243	45	45	All	Other	All
251	244	45	45	All	Other	All
252	245	45	45	All	Other	All
253	246	44	44	All	Other	All
254	247	44	44	All	Other	All
255	248	44	44	All	Other	All
256	249	44	44	All	Other	All
257	250	43	43	All	Other	All
258	251	43	43	All	Other	All
259	252	43	43	All	Other	All
260	253	42	42	All	Other	All
261	254	42	42	All	Other	All
262	255	42	42	All	Other	All
263	256	41	41	All	Other	All
264	257	41	41	All	Other	All
265	258	41	41	All	Other	All
266	259	41	41	All	Other	All
267	260	41	41	All	Other	All
268	261	41	41	All	Other	All
269	262	40	40	All/repeat/mobile_element/Class_I/DIRS	Other	All/repeat/mobile_element/Class_I/DIRS
270	263	40	40	All	Other	All
271	264	40	40	All	Other	All
272	265	40	40	All	Other	All
273	266	39	39	All	Other	All
274	267	39	39	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
275	268	39	39	All	Other	All
276	269	39	39	All	Other	All
277	270	38	38	All	Other	All
278	271	38	38	All	Other	All
279	272	38	38	All	Other	All
280	273	38	38	All	Other	All
281	274	38	38	All	Other	All
282	275	38	38	All	Other	All
283	276	37	37	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
284	277	37	37	All	Other	All
285	278	37	37	All	Other	All
286	279	37	37	All/repeat/mobile_element/Class_I/DIRS	Other	All/repeat/mobile_element/Class_I/DIRS
287	280	36	36	All	Other	All
288	281	36	36	All	Other	All
289	282	36	36	All	Other	All
290	283	36	36	All	Other	All
291	284	36	36	All	Other	All
292	285	35	35	All	Other	All
293	286	35	35	All	Other	All
294	287	35	35	All	Other	All
295	288	35	35	All	Other	All
296	289	35	35	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
297	290	35	35	All	Other	All
298	291	34	34	All	Other	All
299	292	34	34	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
300	293	34	34	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
301	294	34	34	All	Other	All
302	295	34	34	All	Other	All
303	296	34	34	All	Other	All
304	297	33	33	All	Other	All
305	298	33	33	All	Other	All
306	299	33	33	All	Other	All
307	300	33	33	All	Other	All
