Number_of_reads_in_clusters	164779					
Number_of_clusters	17012					
Number_of_superclusters	16996					
Number_of_singlets	168555					
Number_of_analyzed_reads	333334					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	2	5129	5129	All	Putative LTR elements	All
2	4	4704	4704	All	Other	All
3	5	4273	4273	All	Other	All
4	6	3887	3887	All	Other	All
5	7	3839	3839	All	Other	All
6	9	3157	3157	All	Other	All
7	1	2815	2815	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
8	3	2411	2411	All/repeat/mobile_element/Class_I/LINE	Putative satellites (low confidence)	All/repeat/mobile_element/Class_I/LINE
9	11	2345	2345	All	Other	All
10	3	2188	2188	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
11	10	1903	1903	All	Other	All
12	13	1880	1880	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
13	8	1841	1841	All	Other	All
14	14	1835	1835	All	Other	All
15	1	1776	1776	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
16	15	1706	1706	All	Other	All
17	16	1614	1614	All/repeat/mobile_element/Class_II/Subclass_2/Helitron	Other	All/repeat/mobile_element/Class_II/Subclass_2/Helitron
18	1	1535	1535	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
19	17	1432	1432	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
20	19	1379	1379	All	Other	All
21	20	1280	1280	All	Other	All
22	21	1265	1265	All	Other	All
23	1	1149	1149	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
24	22	1100	1100	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Putative satellites (low confidence)	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
25	12	1099	1099	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
26	12	1043	1043	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
27	1	1014	1014	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
28	10	985	985	All	Other	All
29	8	982	982	All	Other	All
30	23	972	972	All/organelle/mitochondria	Other	All/organelle/mitochondria
31	18	965	965	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
32	24	963	963	All	Other	All
33	25	951	951	All	Other	All
34	26	925	925	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
35	27	912	912	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
36	28	877	877	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
37	29	869	869	All	Other	All
38	30	842	842	All/organelle/mitochondria	Other	All/organelle/mitochondria
39	31	798	798	All	Other	All
40	32	772	772	All	Other	All
41	33	761	761	All	Other	All
42	34	756	756	All	Other	All
43	35	733	733	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
44	1	725	725	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
45	36	706	706	All	Other	All
46	37	678	678	All	Other	All
47	38	670	670	All	Other	All
48	39	670	670	All	Other	All
49	40	668	668	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
50	41	644	644	All	Other	All
51	43	609	609	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
52	44	600	600	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
53	45	594	594	All	Other	All
54	8	588	588	All	Other	All
55	46	587	587	All	Other	All
56	42	577	577	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
57	3	573	573	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
58	47	568	568	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
59	48	546	546	All	Other	All
60	49	543	543	All	Other	All
61	50	540	540	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
62	51	539	539	All	Other	All
63	52	527	527	All	Other	All
64	54	471	471	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
65	55	455	455	All	Other	All
66	18	454	454	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
67	56	425	425	All	Other	All
68	57	419	419	All	Other	All
69	58	408	408	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
70	60	404	404	All	Other	All
71	2	396	396	All	Other	All
72	61	391	391	All	Other	All
73	62	380	380	All	Other	All
74	63	337	337	All	Other	All
75	64	332	332	All	Other	All
76	53	324	324	All	Other	All
77	65	301	301	All	Other	All
78	66	290	290	All	Other	All
79	67	277	277	All	Other	All
80	68	276	276	All	Other	All
81	69	272	272	All	Other	All
82	70	271	271	All/repeat/satellite	Putative satellites (high confidence)	All/repeat/satellite
83	71	270	270	All	Other	All
84	72	266	266	All	Other	All
85	59	264	264	All	Other	All
86	73	259	259	All/organelle/mitochondria	Other	All/organelle/mitochondria
87	74	254	254	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
88	75	249	249	All	Other	All
89	76	247	247	All	Other	All
90	77	245	245	All	Other	All
91	78	241	241	All	Other	All
92	79	238	238	All	Other	All
93	80	235	235	All	Other	All
94	81	231	231	All	Other	All
95	82	229	229	All	Other	All
96	83	223	223	All	Other	All
97	84	218	218	All	Other	All
98	85	212	212	All	Other	All
99	86	208	208	All	Other	All
100	87	192	192	All	Other	All
101	88	190	190	All	Other	All
102	89	190	190	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
103	90	188	188	All	Other	All
104	91	187	187	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
105	92	185	185	All	Other	All
106	93	180	180	All	Other	All
107	94	173	173	All	Other	All
108	95	172	172	All	Other	All
109	96	171	171	All	Other	All
110	97	168	168	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
111	98	164	164	All	Other	All
112	99	163	163	All	Other	All
113	100	162	162	All	Other	All
114	101	160	160	All	Other	All
115	102	159	159	All	Other	All
116	103	157	157	All	Other	All
117	53	156	156	All	Other	All
118	104	146	146	All	Other	All
119	105	145	145	All	Other	All
120	59	144	144	All	Other	All
121	106	143	143	All	Other	All
122	107	143	143	All	Other	All
123	108	141	141	All	Other	All
124	109	138	138	All	Other	All
125	110	135	135	All	Other	All
126	111	133	133	All	Other	All
127	112	128	128	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
128	113	128	128	All	Other	All
129	114	117	117	All	Other	All
130	115	116	116	All	Other	All
131	116	116	116	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
132	117	113	113	All	Other	All
133	118	112	112	All	Other	All
134	119	110	110	All	Other	All
135	120	109	109	All	Other	All
136	121	108	108	All	Other	All
137	122	107	107	All	Other	All
138	123	105	105	All	Other	All
139	124	105	105	All	Other	All
140	125	100	100	All	Other	All
141	126	100	100	All	Other	All
142	127	99	99	All	Other	All
143	128	97	97	All	Other	All
144	129	96	96	All	Other	All
145	130	96	96	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
146	131	95	95	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
147	132	94	94	All	Other	All
148	133	93	93	All	Other	All
149	134	92	92	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
150	135	92	92	All	Other	All
151	136	91	91	All	Other	All
152	137	91	91	All	Other	All
153	138	90	90	All	Other	All
154	139	90	90	All	Other	All
155	140	90	90	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
156	141	89	89	All	Other	All
157	142	88	88	All	Other	All
158	143	85	85	All	Other	All
159	144	85	85	All	Other	All
160	145	85	85	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
161	146	84	84	All	Other	All
162	147	83	83	All	Other	All
163	148	83	83	All	Other	All
164	149	80	80	All	Other	All
165	150	79	79	All	Other	All
166	151	78	78	All	Other	All
167	152	78	78	All	Other	All
168	153	78	78	All	Other	All
169	154	77	77	All	Other	All
170	155	77	77	All	Other	All
171	156	77	77	All	Other	All
172	157	74	74	All	Other	All
173	158	72	72	All	Other	All
174	159	72	72	All	Other	All
175	160	71	71	All	Other	All
176	161	71	71	All	Other	All
177	162	71	71	All	Other	All
178	163	70	70	All	Other	All
179	164	68	68	All	Other	All
180	165	68	68	All	Other	All
181	166	68	68	All	Other	All
182	167	68	68	All	Other	All
183	168	67	67	All	Other	All
184	169	67	67	All	Other	All
185	170	67	67	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
186	171	67	67	All	Other	All
187	172	67	67	All	Other	All
188	173	67	67	All	Other	All
189	174	66	66	All	Other	All
190	175	66	66	All	Other	All
191	176	66	66	All	Other	All
192	177	66	66	All	Other	All
193	178	65	65	All	Other	All
194	179	65	65	All	Other	All
195	180	64	64	All	Other	All
196	181	64	64	All	Other	All
197	182	64	64	All	Other	All
198	183	64	64	All	Other	All
199	184	63	63	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
200	185	63	63	All	Other	All
201	186	63	63	All	Other	All
202	187	63	63	All	Other	All
203	188	62	62	All	Other	All
204	189	62	62	All	Other	All
205	190	61	61	All	Other	All
206	191	60	60	All	Other	All
207	192	60	60	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
208	193	60	60	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
209	194	59	59	All	Other	All
210	195	59	59	All	Other	All
211	196	58	58	All	Other	All
212	197	57	57	All	Other	All
213	198	56	56	All	Other	All
214	199	55	55	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
215	200	54	54	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
216	201	54	54	All	Other	All
217	202	53	53	All	Other	All
218	203	52	52	All	Other	All
219	204	52	52	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
220	205	51	51	All	Other	All
221	206	51	51	All	Other	All
222	207	50	50	All	Other	All
223	208	49	49	All	Other	All
224	209	49	49	All	Other	All
225	210	49	49	All	Other	All
226	211	49	49	All	Other	All
227	212	48	48	All	Other	All
228	213	48	48	All	Other	All
229	214	47	47	All	Other	All
230	215	47	47	All	Other	All
231	216	47	47	All	Other	All
232	217	46	46	All	Other	All
233	218	46	46	All	Other	All
234	219	46	46	All	Other	All
235	220	46	46	All	Other	All
236	221	46	46	All	Other	All
237	222	45	45	All	Other	All
238	223	45	45	All	Other	All
239	224	45	45	All	Other	All
240	225	45	45	All	Other	All
241	226	45	45	All	Other	All
242	227	45	45	All	Other	All
243	228	45	45	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
244	229	44	44	All	Other	All
245	230	44	44	All	Other	All
246	231	44	44	All	Other	All
247	232	43	43	All	Other	All
248	233	43	43	All	Other	All
249	234	43	43	All	Other	All
250	235	43	43	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
251	236	42	42	All	Other	All
252	237	42	42	All	Other	All
253	238	42	42	All	Other	All
254	239	42	42	All	Other	All
255	240	42	42	All	Other	All
256	241	41	41	All	Other	All
257	242	41	41	All	Other	All
258	243	41	41	All	Other	All
259	244	41	41	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
260	245	41	41	All	Other	All
261	246	41	41	All	Other	All
262	247	40	40	All	Other	All
263	248	40	40	All	Other	All
264	249	40	40	All	Other	All
265	250	40	40	All	Other	All
266	251	40	40	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
267	252	40	40	All	Other	All
268	253	40	40	All	Other	All
269	254	39	39	All	Other	All
270	255	39	39	All	Other	All
271	256	39	39	All	Other	All
272	257	39	39	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
273	258	39	39	All	Other	All
274	259	39	39	All	Other	All
275	260	39	39	All	Other	All
276	261	39	39	All	Other	All
277	262	39	39	All	Other	All
278	263	39	39	All	Other	All
279	264	38	38	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
280	265	38	38	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
281	266	38	38	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
282	267	38	38	All	Other	All
283	268	38	38	All	Other	All
284	269	37	37	All	Other	All
285	270	37	37	All	Other	All
286	271	36	36	All	Other	All
287	272	35	35	All	Other	All
288	273	35	35	All	Other	All
289	274	35	35	All	Other	All
290	275	35	35	All	Other	All
291	276	35	35	All	Other	All
292	277	35	35	All	Other	All
293	42	34	34	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
294	278	34	34	All	Other	All
295	279	34	34	All	Other	All
296	280	34	34	All	Other	All
297	281	34	34	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
298	282	34	34	All	Other	All
299	283	34	34	All	Other	All
300	284	34	34	All	Other	All
301	285	34	34	All	Other	All
302	286	33	33	All	Other	All
303	287	33	33	All	Other	All
304	288	33	33	All	Other	All
305	289	33	33	All	Other	All
306	290	33	33	All	Other	All
