Number_of_reads_in_clusters	133741					
Number_of_clusters	18489					
Number_of_superclusters	18473					
Number_of_singlets	199593					
Number_of_analyzed_reads	333334					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	4731	4731	All	Other	All
2	2	4248	4248	All	Other	All
3	4	3374	3374	All	Other	All
4	5	3366	3366	All	Other	All
5	7	2907	2907	All	Other	All
6	8	2866	2866	All	Other	All
7	3	2164	2164	All	Other	All
8	6	2081	2081	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
9	11	1804	1804	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
10	3	1539	1539	All	Other	All
11	13	1427	1427	All	Other	All
12	10	1160	1160	All	Other	All
13	15	1160	1160	All	Other	All
14	12	1146	1146	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
15	16	1129	1129	All	Other	All
16	17	1045	1045	All	Other	All
17	18	932	932	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
18	6	850	850	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
19	19	835	835	All	Other	All
20	9	772	772	All/organelle/mitochondria	Other	All/organelle/mitochondria
21	21	767	767	All	Other	All
22	9	758	758	All/organelle/mitochondria	Other	All/organelle/mitochondria
23	14	753	753	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
24	10	737	737	All	Other	All
25	22	709	709	All	Other	All
26	23	683	683	All	Other	All
27	24	683	683	All	Other	All
28	9	678	678	All/organelle/mitochondria	Other	All/organelle/mitochondria
29	26	638	638	All	Other	All
30	27	628	628	All	Other	All
31	28	605	605	All	Other	All
32	29	584	584	All	Other	All
33	30	573	573	All	Other	All
34	31	515	515	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
35	32	506	506	All	Other	All
36	34	497	497	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
37	35	491	491	All	Other	All
38	37	472	472	All	Other	All
39	38	468	468	All	Other	All
40	20	466	466	All	Other	All
41	39	456	456	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
42	40	438	438	All	Other	All
43	33	435	435	All/repeat	Putative satellites (low confidence)	All/repeat
44	14	428	428	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
45	12	426	426	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
46	41	425	425	All	Other	All
47	36	415	415	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
48	25	410	410	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
49	42	405	405	All	Other	All
50	43	398	398	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
51	44	376	376	All	Other	All
52	45	362	362	All	Other	All
53	46	350	350	All	Other	All
54	47	350	350	All/repeat/rDNA/45S_rDNA/25S_rDNA	Other	All/repeat/rDNA/45S_rDNA/25S_rDNA
55	48	346	346	All	Other	All
56	20	339	339	All	Other	All
57	49	336	336	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
58	50	326	326	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
59	51	324	324	All	Other	All
60	52	315	315	All	Other	All
61	53	313	313	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
62	9	301	301	All/organelle/mitochondria	Other	All/organelle/mitochondria
63	55	286	286	All	Other	All
64	56	282	282	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
65	54	272	272	All	Other	All
66	57	271	271	All	Other	All
67	58	261	261	All	Other	All
68	59	259	259	All	Other	All
69	60	255	255	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
70	61	248	248	All	Other	All
71	62	248	248	All	Other	All
72	63	247	247	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
73	64	246	246	All	Other	All
74	65	243	243	All	Other	All
75	66	241	241	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
76	67	240	240	All	Other	All
77	68	229	229	All	Other	All
78	69	220	220	All	Other	All
79	70	218	218	All	Other	All
80	71	217	217	All	Other	All
81	72	214	214	All	Other	All
82	73	209	209	All	Other	All
83	74	206	206	All	Other	All
84	25	197	197	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
85	75	191	191	All	Other	All
86	76	190	190	All	Other	All
87	77	187	187	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
88	79	183	183	All	Other	All
89	80	171	171	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
90	81	168	168	All	Other	All
91	82	165	165	All	Other	All
92	83	164	164	All/repeat/rDNA/45S_rDNA/18S_rDNA	Other	All/repeat/rDNA/45S_rDNA/18S_rDNA
93	84	163	163	All	Other	All
94	85	160	160	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
95	86	156	156	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
96	87	150	150	All	Other	All
97	88	150	150	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
98	89	149	149	All	Other	All
99	90	148	148	All	Other	All
100	91	146	146	All	Other	All
101	78	146	146	All	Other	All
102	92	143	143	All	Other	All
103	93	142	142	All	Other	All
104	94	138	138	All	Other	All
105	95	138	138	All	Other	All
106	96	136	136	All	Other	All
107	97	131	131	All	Other	All
108	98	131	131	All	Other	All
109	99	131	131	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
110	100	126	126	All	Other	All
111	101	125	125	All	Other	All
112	102	124	124	All	Other	All
113	103	123	123	All	Other	All
114	105	121	121	All	Other	All
115	106	113	113	All	Other	All
116	107	112	112	All	Other	All
117	108	108	108	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
118	109	106	106	All	Other	All
119	110	106	106	All	Other	All
120	111	105	105	All	Other	All
121	112	103	103	All	Other	All
122	113	103	103	All	Other	All
123	114	100	100	All	Other	All
124	115	99	99	All	Other	All
125	116	99	99	All	Other	All
126	117	98	98	All	Other	All
127	118	97	97	All	Other	All
128	119	95	95	All	Other	All
129	120	93	93	All	Other	All
130	121	92	92	All	Other	All
131	122	91	91	All	Other	All
132	123	89	89	All	Other	All
133	124	86	86	All	Other	All
134	125	85	85	All	Other	All
135	126	85	85	All	Other	All
136	127	83	83	All	Other	All
137	128	83	83	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
138	129	82	82	All	Other	All
139	130	82	82	All	Other	All
140	131	81	81	All	Other	All
141	132	80	80	All	Other	All
142	133	80	80	All	Other	All
143	134	80	80	All	Other	All
144	135	80	80	All	Other	All
145	136	80	80	All	Other	All
146	137	80	80	All	Other	All
147	138	80	80	All	Other	All
148	139	79	79	All	Other	All
149	140	78	78	All	Other	All
150	141	78	78	All	Other	All
151	104	77	77	All	Other	All
152	142	77	77	All	Other	All
153	143	76	76	All	Other	All
154	144	76	76	All	Other	All
155	145	74	74	All	Other	All
156	146	73	73	All	Other	All
157	147	73	73	All	Other	All
158	148	71	71	All	Other	All
159	149	71	71	All	Other	All
160	150	71	71	All	Other	All
161	151	71	71	All	Other	All
162	152	71	71	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
163	153	68	68	All	Other	All
164	154	68	68	All	Other	All
165	155	68	68	All	Other	All
166	156	68	68	All	Other	All
167	157	67	67	All	Other	All
168	33	67	67	All/repeat	Other	All/repeat
169	158	66	66	All	Other	All
170	159	66	66	All	Other	All
171	36	65	65	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
172	160	65	65	All	Other	All
173	161	65	65	All	Other	All
174	162	64	64	All	Other	All
175	163	64	64	All	Other	All
176	164	63	63	All	Other	All
177	165	63	63	All	Other	All
178	166	62	62	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
179	167	62	62	All	Other	All
180	168	60	60	All	Other	All
181	169	60	60	All	Other	All
182	170	59	59	All	Other	All
183	171	58	58	All	Other	All
184	172	58	58	All	Other	All
185	173	58	58	All	Other	All
186	174	57	57	All	Other	All
187	175	57	57	All	Other	All
188	176	56	56	All	Other	All
189	177	56	56	All	Other	All
190	178	55	55	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
191	179	55	55	All	Other	All
192	180	54	54	All	Other	All
193	181	54	54	All	Other	All
194	182	54	54	All	Other	All
195	183	54	54	All	Other	All
196	184	53	53	All	Other	All
197	185	53	53	All	Other	All
198	186	53	53	All	Other	All
199	187	52	52	All	Other	All
200	188	52	52	All	Other	All
201	189	51	51	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
202	190	51	51	All	Other	All
203	191	51	51	All	Other	All
204	192	50	50	All	Other	All
205	193	50	50	All	Other	All
206	194	50	50	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
207	195	49	49	All	Other	All
208	196	49	49	All	Other	All
209	197	49	49	All	Other	All
210	25	48	48	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
211	198	48	48	All	Other	All
212	199	47	47	All	Other	All
213	200	47	47	All	Other	All
214	201	47	47	All	Other	All
215	202	46	46	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
216	203	46	46	All	Other	All
217	204	46	46	All	Other	All
218	205	46	46	All	Other	All
219	206	46	46	All	Other	All
220	207	46	46	All	Other	All
221	208	46	46	All	Other	All
222	209	46	46	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
223	210	45	45	All	Other	All
224	211	45	45	All	Other	All
225	212	45	45	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
226	213	45	45	All	Other	All
227	214	44	44	All	Other	All
228	215	44	44	All	Other	All
229	104	44	44	All	Other	All
230	216	44	44	All	Other	All
231	217	44	44	All	Other	All
232	218	44	44	All	Other	All
233	219	44	44	All	Other	All
234	220	44	44	All	Other	All
235	221	44	44	All	Other	All
236	222	43	43	All	Other	All
237	223	43	43	All	Other	All
238	224	42	42	All	Other	All
239	225	42	42	All	Other	All
240	226	41	41	All	Other	All
241	227	41	41	All	Other	All
242	228	41	41	All	Other	All
243	229	41	41	All	Other	All
244	230	41	41	All	Other	All
245	231	40	40	All	Other	All
246	232	40	40	All	Other	All
247	233	40	40	All	Other	All
248	234	40	40	All	Other	All
249	235	39	39	All	Other	All
250	236	39	39	All	Other	All
251	237	39	39	All	Other	All
252	238	39	39	All	Other	All
253	239	39	39	All	Other	All
254	240	39	39	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
255	241	39	39	All	Other	All
256	242	39	39	All	Other	All
257	243	39	39	All	Other	All
258	244	39	39	All	Other	All
259	245	38	38	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
260	246	38	38	All	Other	All
261	78	38	38	All	Other	All
262	247	38	38	All	Other	All
263	248	38	38	All	Other	All
264	249	38	38	All	Other	All
265	250	37	37	All	Other	All
266	251	37	37	All	Other	All
267	252	37	37	All	Other	All
268	253	37	37	All	Other	All
269	254	37	37	All	Other	All
270	255	37	37	All	Other	All
271	256	36	36	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
272	257	36	36	All	Other	All
273	258	36	36	All	Other	All
274	259	36	36	All	Other	All
275	260	36	36	All	Other	All
276	261	35	35	All	Other	All
277	262	35	35	All	Other	All
278	263	35	35	All	Other	All
279	264	35	35	All	Other	All
280	265	35	35	All	Other	All
281	266	34	34	All	Other	All
282	267	34	34	All	Other	All
283	268	34	34	All	Other	All
284	269	34	34	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
285	270	34	34	All	Other	All
286	271	34	34	All	Other	All
287	272	33	33	All	Other	All
288	273	33	33	All	Other	All
289	54	33	33	All	Other	All
290	274	33	33	All	Other	All
291	275	33	33	All	Other	All
292	276	33	33	All	Other	All
293	277	33	33	All	Other	All
294	278	33	33	All	Other	All
295	279	33	33	All	Other	All
