Number_of_reads_in_clusters	150248					
Number_of_clusters	17464					
Number_of_superclusters	17458					
Number_of_singlets	183086					
Number_of_analyzed_reads	333334					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	4910	4910	All	Other	All
2	2	4604	4604	All	Other	All
3	3	3577	3577	All	Other	All
4	4	3421	3421	All	Other	All
5	5	3105	3105	All	Other	All
6	7	2961	2961	All	Other	All
7	9	2335	2335	All	Other	All
8	10	2132	2132	All	Other	All
9	11	1904	1904	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
10	8	1813	1813	All	Other	All
11	12	1740	1740	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
12	13	1666	1666	All	Other	All
13	14	1556	1556	All	Other	All
14	15	1419	1419	All	Other	All
15	16	1387	1387	All	Other	All
16	17	1384	1384	All	Other	All
17	18	1364	1364	All	Other	All
18	6	1323	1323	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
19	20	1291	1291	All	Other	All
20	21	1219	1219	All	Other	All
21	19	1185	1185	All/repeat	Putative satellites (low confidence)	All/repeat
22	22	1118	1118	All	Other	All
23	23	1114	1114	All	Other	All
24	8	1096	1096	All	Other	All
25	6	1036	1036	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
26	25	973	973	All	Other	All
27	26	948	948	All	Other	All
28	27	941	941	All	Other	All
29	28	844	844	All	Other	All
30	29	788	788	All	Other	All
31	6	692	692	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
32	30	688	688	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
33	31	681	681	All	Other	All
34	32	643	643	All	Other	All
35	33	633	633	All	Other	All
36	34	611	611	All	Other	All
37	35	603	603	All	Other	All
38	36	588	588	All	Other	All
39	37	587	587	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
40	38	576	576	All	Other	All
41	24	563	563	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
42	39	550	550	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
43	24	550	550	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
44	40	533	533	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
45	41	531	531	All	Other	All
46	42	514	514	All	Other	All
47	43	490	490	All	Other	All
48	44	485	485	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
49	45	483	483	All	Other	All
50	46	463	463	All	Other	All
51	47	440	440	All	Other	All
52	48	440	440	All	Other	All
53	49	436	436	All	Other	All
54	50	434	434	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
55	51	429	429	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
56	53	421	421	All	Other	All
57	54	420	420	All	Other	All
58	55	420	420	All	Other	All
59	56	418	418	All/repeat/satellite	Putative satellites (high confidence)	All/repeat/satellite
60	57	417	417	All	Other	All
61	58	410	410	All	Other	All
62	59	410	410	All	Other	All
63	60	409	409	All	Other	All
64	61	403	403	All	Other	All
65	62	382	382	All	Other	All
66	63	377	377	All	Other	All
67	64	366	366	All	Other	All
68	65	365	365	All	Other	All
69	66	364	364	All	Other	All
70	67	363	363	All	Other	All
71	68	362	362	All	Other	All
72	69	358	358	All	Other	All
73	70	354	354	All	Other	All
74	71	344	344	All	Other	All
75	72	343	343	All/repeat/satellite	Putative satellites (high confidence)	All/repeat/satellite
76	73	341	341	All/repeat/satellite	Putative satellites (high confidence)	All/repeat/satellite
77	74	334	334	All	Other	All
78	75	333	333	All	Other	All
79	52	329	329	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
80	76	313	313	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
81	77	309	309	All	Other	All
82	78	306	306	All	Other	All
83	79	303	303	All	Other	All
84	80	293	293	All	Other	All
85	81	278	278	All	Other	All
86	82	266	266	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
87	83	258	258	All	Other	All
88	84	248	248	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
89	85	248	248	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
90	86	246	246	All	Other	All
91	87	244	244	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
92	88	240	240	All	Other	All
93	89	238	238	All	Other	All
94	90	232	232	All	Other	All
95	91	230	230	All	Other	All
96	92	227	227	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
97	93	226	226	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
98	94	224	224	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
99	95	216	216	All	Other	All
100	96	209	209	All	Other	All
101	97	208	208	All	Other	All
102	98	201	201	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
103	99	195	195	All	Other	All
104	100	192	192	All	Other	All
105	101	191	191	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy
106	102	188	188	All	Other	All
107	103	188	188	All/organelle/mitochondria	Other	All/organelle/mitochondria
108	104	188	188	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
109	105	185	185	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
110	106	184	184	All	Other	All
111	107	183	183	All	Other	All
112	108	181	181	All	Other	All
113	109	181	181	All	Other	All
114	110	173	173	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
115	111	169	169	All	Other	All
116	112	167	167	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
117	19	163	163	All/repeat	Other	All/repeat
118	113	163	163	All	Other	All
119	114	157	157	All	Other	All
120	115	156	156	All/organelle/mitochondria	Other	All/organelle/mitochondria
121	116	154	154	All	Other	All
122	117	153	153	All	Other	All
123	118	147	147	All	Other	All
124	119	145	145	All	Other	All
125	120	144	144	All	Other	All
126	121	140	140	All	Other	All
127	122	138	138	All	Other	All
128	123	135	135	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
129	124	134	134	All	Other	All
130	125	131	131	All	Other	All
131	126	130	130	All	Other	All
132	127	129	129	All	Other	All
133	128	125	125	All	Other	All
134	129	122	122	All	Other	All
135	130	122	122	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
136	131	116	116	All	Other	All
137	132	115	115	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
138	133	113	113	All	Other	All
139	134	112	112	All	Other	All
140	135	111	111	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
141	136	110	110	All	Other	All
142	137	110	110	All	Other	All
143	138	106	106	All	Other	All
144	139	104	104	All	Other	All
145	140	103	103	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
146	141	102	102	All/organelle/mitochondria	Other	All/organelle/mitochondria
147	142	102	102	All/organelle/mitochondria	Other	All/organelle/mitochondria
148	143	100	100	All	Other	All
149	52	99	99	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
150	144	98	98	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
151	145	96	96	All	Other	All
152	146	96	96	All	Other	All
153	147	95	95	All	Other	All
154	148	95	95	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
155	149	94	94	All	Other	All
156	150	93	93	All	Other	All
157	151	92	92	All	Other	All
158	152	90	90	All	Other	All
159	153	90	90	All	Other	All
160	154	89	89	All	Other	All
161	155	89	89	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
162	156	88	88	All	Other	All
163	157	87	87	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
164	158	87	87	All	Other	All
165	159	86	86	All	Other	All
166	160	86	86	All	Other	All
167	161	85	85	All	Other	All
168	162	85	85	All	Other	All
169	163	84	84	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
170	164	84	84	All	Other	All
171	165	82	82	All	Other	All
172	166	81	81	All	Other	All
173	167	78	78	All	Other	All
174	168	78	78	All	Other	All
175	169	78	78	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
176	170	77	77	All	Other	All
177	171	77	77	All	Other	All
178	172	76	76	All	Other	All
179	173	75	75	All	Other	All
180	174	72	72	All	Other	All
181	175	72	72	All	Other	All
182	176	72	72	All	Other	All
183	177	72	72	All/repeat/mobile_element/Class_II/Subclass_2/Helitron	Other	All/repeat/mobile_element/Class_II/Subclass_2/Helitron
184	178	72	72	All	Other	All
185	179	70	70	All/organelle/mitochondria	Other	All/organelle/mitochondria
186	180	70	70	All/organelle/mitochondria	Other	All/organelle/mitochondria
187	181	70	70	All	Other	All
188	182	69	69	All	Other	All
189	183	69	69	All	Other	All
190	184	68	68	All	Other	All
191	185	67	67	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
192	186	66	66	All	Other	All
193	187	66	66	All	Other	All
194	188	66	66	All	Other	All
195	189	66	66	All	Other	All
196	190	65	65	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
197	191	64	64	All	Other	All
198	192	62	62	All	Other	All
199	193	62	62	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
200	194	61	61	All	Other	All
201	195	60	60	All	Other	All
202	196	59	59	All	Other	All
203	197	59	59	All	Other	All
204	198	59	59	All	Other	All
205	199	59	59	All	Other	All
206	200	59	59	All	Other	All
207	201	58	58	All	Other	All
208	202	58	58	All	Other	All
209	203	57	57	All	Other	All
210	204	57	57	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
211	205	57	57	All	Other	All
212	206	57	57	All	Other	All
213	207	57	57	All	Other	All
214	208	56	56	All	Other	All
215	209	56	56	All	Other	All
216	210	55	55	All	Other	All
217	211	54	54	All	Other	All
218	212	54	54	All/organelle/plastid	Other	All/organelle/plastid
219	213	53	53	All	Other	All
220	214	52	52	All	Other	All
221	215	52	52	All	Other	All
222	216	52	52	All	Other	All
223	217	51	51	All	Other	All
224	218	49	49	All	Other	All
225	219	49	49	All	Other	All
226	220	49	49	All	Other	All
227	221	48	48	All	Other	All
228	222	48	48	All	Other	All
229	223	47	47	All	Other	All
230	224	47	47	All	Other	All
231	225	47	47	All	Other	All
232	226	45	45	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
233	227	44	44	All	Other	All
234	228	44	44	All	Other	All
235	229	44	44	All	Other	All
236	230	44	44	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
237	231	43	43	All	Other	All
238	232	43	43	All/repeat/mobile_element/Class_I/LTR/Bel-Pao	Other	All/repeat/mobile_element/Class_I/LTR/Bel-Pao
239	233	43	43	All	Other	All
240	234	42	42	All	Other	All
241	235	42	42	All	Other	All
242	236	42	42	All	Other	All
243	237	42	42	All	Other	All
244	238	41	41	All	Other	All
245	239	41	41	All	Other	All
246	240	41	41	All	Other	All
247	241	40	40	All	Other	All
248	242	40	40	All	Other	All
249	243	40	40	All	Other	All
250	244	40	40	All	Other	All
251	245	40	40	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
252	246	39	39	All	Other	All
253	247	38	38	All	Other	All
254	248	38	38	All	Other	All
255	249	38	38	All	Other	All
256	250	38	38	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
257	251	37	37	All/repeat/mobile_element/Class_I/Penelope	Other	All/repeat/mobile_element/Class_I/Penelope
258	252	37	37	All	Other	All
259	253	37	37	All	Other	All
260	254	37	37	All	Other	All
261	255	37	37	All/organelle/mitochondria	Other	All/organelle/mitochondria
262	256	37	37	All/repeat/mobile_element/Class_II/Subclass_2/Maverick	Other	All/repeat/mobile_element/Class_II/Subclass_2/Maverick
263	257	37	37	All	Other	All
264	258	37	37	All	Other	All
265	259	36	36	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
266	260	36	36	All	Other	All
267	261	36	36	All	Other	All
268	262	36	36	All	Other	All
269	263	36	36	All	Other	All
270	264	35	35	All	Other	All
271	265	35	35	All	Other	All
272	266	35	35	All	Other	All
273	267	35	35	All	Other	All
274	268	35	35	All	Other	All
275	269	35	35	All	Other	All
276	270	35	35	All	Other	All
277	271	34	34	All	Other	All
278	272	34	34	All	Other	All
279	273	34	34	All	Other	All
280	274	33	33	All	Other	All
281	275	33	33	All	Other	All
282	276	33	33	All	Other	All
283	277	33	33	All/repeat/mobile_element/Class_I/LINE	Other	All/repeat/mobile_element/Class_I/LINE
