Number_of_reads_in_clusters	99756					
Number_of_clusters	12233					
Number_of_superclusters	12179					
Number_of_singlets	141484					
Number_of_analyzed_reads	241240					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	5	2190	2190	All	Other	All
2	9	1650	1650	All	Other	All
3	1	1610	1610	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
4	2	1515	1515	All/organelle/plastid	Other	All/organelle/plastid
5	1	1258	1258	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
6	1	1251	1251	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
7	4	1228	1228	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
8	8	1224	1224	All/repeat	Putative satellites (low confidence)	All/repeat
9	1	1200	1200	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
10	1	1115	1115	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Putative satellites (low confidence)	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
11	10	1111	1111	All	Other	All
12	11	1109	1109	All	Other	All
13	2	1033	1033	All/organelle/plastid	Other	All/organelle/plastid
14	2	1018	1018	All/organelle/plastid	Other	All/organelle/plastid
15	1	1008	1008	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
16	2	943	943	All/organelle/plastid	Other	All/organelle/plastid
17	3	927	927	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
18	1	888	888	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
19	6	876	876	All	Other	All
20	1	841	841	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
21	4	771	771	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
22	2	771	771	All/organelle/plastid	Other	All/organelle/plastid
23	3	765	765	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
24	2	761	761	All/organelle/plastid	Other	All/organelle/plastid
25	1	730	730	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
26	1	689	689	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
27	3	682	682	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
28	13	670	670	All	Other	All
29	7	647	647	All/organelle/plastid	Other	All/organelle/plastid
30	15	642	642	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
31	1	640	640	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
32	3	619	619	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
33	7	612	612	All/organelle/plastid	Other	All/organelle/plastid
34	3	610	610	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
35	2	609	609	All/organelle/plastid	Other	All/organelle/plastid
36	2	592	592	All/organelle/plastid	Other	All/organelle/plastid
37	16	583	583	All/organelle/plastid	Other	All/organelle/plastid
38	6	583	583	All	Other	All
39	2	575	575	All/organelle/plastid	Other	All/organelle/plastid
40	14	558	558	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
41	17	542	542	All	Other	All
42	18	539	539	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
43	19	525	525	All/organelle/plastid	Other	All/organelle/plastid
44	20	516	516	All/organelle/plastid	Other	All/organelle/plastid
45	12	504	504	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
46	21	500	500	All	Other	All
47	12	498	498	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
48	22	484	484	All	Other	All
49	23	468	468	All/organelle/plastid	Other	All/organelle/plastid
50	7	461	461	All/organelle/plastid	Other	All/organelle/plastid
51	24	455	455	All/organelle/plastid	Other	All/organelle/plastid
52	25	444	444	All/organelle/plastid	Other	All/organelle/plastid
53	6	436	436	All	Other	All
54	26	433	433	All	Other	All
55	1	430	430	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
56	27	429	429	All/organelle/plastid	Other	All/organelle/plastid
57	2	428	428	All/organelle/plastid	Other	All/organelle/plastid
58	4	426	426	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
59	28	410	410	All	Other	All
60	2	407	407	All/organelle/plastid	Other	All/organelle/plastid
61	29	399	399	All	Other	All
62	2	390	390	All/organelle/plastid	Other	All/organelle/plastid
63	30	388	388	All	Other	All
64	32	382	382	All	Other	All
65	33	379	379	All	Other	All
66	34	350	350	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
67	35	349	349	All/organelle/plastid	Other	All/organelle/plastid
68	36	344	344	All	Other	All
69	3	339	339	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
70	37	333	333	All/organelle/plastid	Other	All/organelle/plastid
71	1	332	332	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
72	38	329	329	All	Other	All
73	39	301	301	All/organelle/plastid	Other	All/organelle/plastid
74	14	297	297	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
75	40	290	290	All	Other	All
76	41	278	278	All	Other	All
77	42	269	269	All	Other	All
78	43	267	267	All/organelle/plastid	Other	All/organelle/plastid
79	44	267	267	All/organelle/plastid	Other	All/organelle/plastid
80	45	265	265	All	Other	All
81	46	259	259	All	Other	All
82	10	257	257	All	Other	All
83	2	257	257	All/organelle/plastid	Other	All/organelle/plastid
84	47	256	256	All/organelle/plastid	Other	All/organelle/plastid
85	8	255	255	All/repeat	Other	All/repeat
86	48	254	254	All/organelle/plastid	Other	All/organelle/plastid
87	4	251	251	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
88	3	237	237	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
89	31	237	237	All	Other	All
90	13	217	217	All	Other	All
91	3	212	212	All/repeat/rDNA/45S_rDNA	Putative LTR elements	All/repeat/rDNA/45S_rDNA
92	49	209	209	All/organelle/plastid	Other	All/organelle/plastid
93	50	196	196	All	Other	All
94	2	178	178	All/organelle/plastid	Other	All/organelle/plastid
95	51	176	176	All	Other	All
96	52	175	175	All	Other	All
97	2	174	174	All/organelle/plastid	Other	All/organelle/plastid
98	53	174	174	All	Other	All
99	54	172	172	All	Other	All
100	55	169	169	All/organelle/plastid	Other	All/organelle/plastid
101	56	164	164	All/organelle/plastid	Other	All/organelle/plastid
102	57	164	164	All/organelle/plastid	Other	All/organelle/plastid
103	58	161	161	All	Other	All
104	10	156	156	All	Other	All
105	59	154	154	All	Other	All
106	60	154	154	All/organelle/plastid	Other	All/organelle/plastid
107	8	154	154	All/repeat	Other	All/repeat
108	61	153	153	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
109	62	150	150	All/organelle/plastid	Other	All/organelle/plastid
110	31	148	148	All	Other	All
111	63	145	145	All	Other	All
112	64	139	139	All	Other	All
113	65	136	136	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
114	2	134	134	All/organelle/plastid	Other	All/organelle/plastid
115	66	134	134	All	Other	All
116	67	132	132	All	Other	All
117	68	128	128	All	Other	All
118	69	128	128	All/organelle/plastid	Other	All/organelle/plastid
119	70	126	126	All/organelle/plastid	Other	All/organelle/plastid
120	71	122	122	All	Other	All
121	72	113	113	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
122	73	113	113	All	Other	All
123	74	112	112	All/organelle/plastid	Other	All/organelle/plastid
124	75	107	107	All/organelle/plastid	Other	All/organelle/plastid
125	76	106	106	All/organelle/plastid	Other	All/organelle/plastid
126	4	106	106	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
127	77	101	101	All/organelle/plastid	Other	All/organelle/plastid
128	2	100	100	All/organelle/plastid	Other	All/organelle/plastid
129	78	99	99	All	Other	All
130	79	98	98	All	Other	All
131	80	98	98	All	Other	All
132	81	97	97	All	Other	All
133	82	96	96	All	Other	All
134	83	95	95	All/organelle/plastid	Other	All/organelle/plastid
135	84	95	95	All	Other	All
136	85	94	94	All	Other	All
137	86	94	94	All	Other	All
138	87	94	94	All/organelle/plastid	Other	All/organelle/plastid
139	88	93	93	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
140	89	92	92	All	Other	All
141	90	92	92	All	Other	All
142	91	89	89	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
143	92	86	86	All	Other	All
144	93	86	86	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
145	94	85	85	All	Other	All
146	95	83	83	All/organelle/plastid	Other	All/organelle/plastid
147	96	83	83	All	Other	All
148	97	82	82	All/organelle/plastid	Other	All/organelle/plastid
149	98	79	79	All	Other	All
150	99	79	79	All	Other	All
151	100	78	78	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
152	101	77	77	All	Other	All
153	102	75	75	All	Other	All
154	103	74	74	All	Other	All
155	104	73	73	All	Other	All
156	4	73	73	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
157	105	70	70	All	Other	All
158	106	70	70	All	Other	All
159	107	68	68	All	Other	All
160	108	67	67	All	Other	All
161	109	66	66	All	Other	All
162	110	65	65	All	Other	All
163	111	60	60	All	Other	All
164	112	59	59	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
165	113	57	57	All	Other	All
166	114	54	54	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
167	115	54	54	All	Other	All
168	116	54	54	All	Other	All
169	117	53	53	All	Other	All
170	118	52	52	All	Other	All
171	119	51	51	All/organelle/plastid	Other	All/organelle/plastid
172	120	50	50	All	Other	All
173	121	49	49	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
174	122	49	49	All	Other	All
175	123	48	48	All	Other	All
176	124	48	48	All	Other	All
177	125	48	48	All	Other	All
178	126	48	48	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
179	127	47	47	All	Other	All
180	128	47	47	All	Other	All
181	129	45	45	All	Other	All
182	130	44	44	All	Other	All
183	131	43	43	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
184	8	43	43	All/repeat	Other	All/repeat
185	132	43	43	All	Other	All
186	133	43	43	All	Other	All
187	134	42	42	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
188	135	41	41	All	Other	All
189	136	41	41	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
190	137	40	40	All	Other	All
191	138	39	39	All	Other	All
192	6	39	39	All	Other	All
193	139	38	38	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
194	140	38	38	All	Other	All
195	141	38	38	All	Other	All
196	142	38	38	All	Other	All
197	143	36	36	All	Other	All
198	144	36	36	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
199	145	36	36	All	Other	All
200	146	36	36	All	Other	All
201	147	36	36	All	Other	All
202	148	35	35	All	Other	All
203	149	35	35	All	Other	All
204	150	35	35	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
205	151	34	34	All	Other	All
206	152	34	34	All	Other	All
207	153	34	34	All	Other	All
208	154	34	34	All	Other	All
209	155	34	34	All	Other	All
210	156	34	34	All	Other	All
211	157	33	33	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
212	158	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
213	159	32	32	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
214	160	32	32	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
215	161	32	32	All	Other	All
216	162	32	32	All	Other	All
217	163	32	32	All	Other	All
218	164	31	31	All	Other	All
219	165	31	31	All	Other	All
220	166	31	31	All	Other	All
221	167	31	31	All	Other	All
222	168	31	31	All	Other	All
223	169	31	31	All	Other	All
224	170	31	31	All	Other	All
225	171	31	31	All	Other	All
226	172	31	31	All	Other	All
227	173	30	30	All/organelle/plastid	Other	All/organelle/plastid
228	174	30	30	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
229	175	30	30	All	Other	All
230	176	30	30	All	Other	All
231	177	29	29	All	Other	All
232	178	29	29	All	Other	All
233	179	29	29	All	Other	All
234	180	28	28	All	Other	All
235	181	28	28	All	Other	All
236	182	28	28	All	Other	All
237	183	28	28	All	Other	All
238	184	27	27	All/organelle/plastid	Other	All/organelle/plastid
239	185	27	27	All	Other	All
240	186	27	27	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
241	187	26	26	All	Other	All
242	188	26	26	All	Other	All
243	189	26	26	All	Other	All
244	190	26	26	All	Other	All
245	191	26	26	All	Other	All
246	192	26	26	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
247	193	26	26	All	Other	All
248	194	25	25	All	Other	All
249	195	25	25	All	Other	All
250	196	25	25	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
251	197	25	25	All	Other	All
252	198	25	25	All	Other	All
253	199	25	25	All	Other	All
254	200	24	24	All	Other	All
255	201	24	24	All	Other	All
256	202	24	24	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
257	203	24	24	All	Other	All
258	204	24	24	All	Other	All
259	205	24	24	All	Other	All
260	206	24	24	All	Other	All
261	207	24	24	All	Other	All
262	208	24	24	All	Other	All
263	209	24	24	All	Other	All
264	210	24	24	All	Other	All
265	211	24	24	All	Other	All
266	212	24	24	All	Other	All
