Number_of_reads_in_clusters	98960					
Number_of_clusters	12389					
Number_of_superclusters	12377					
Number_of_singlets	148800					
Number_of_analyzed_reads	247760					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	5226	5226	All	Other	All
2	1	4732	4732	All	Other	All
3	1	4694	4694	All	Other	All
4	1	2952	2952	All	Other	All
5	3	2644	2644	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
6	2	2364	2364	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
7	2	2128	2128	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
8	6	2006	2006	All	Other	All
9	2	1916	1916	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
10	2	1868	1868	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
11	4	1653	1653	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
12	3	1610	1610	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
13	7	1506	1506	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
14	9	1420	1420	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
15	5	1190	1190	All/organelle/plastid	Other	All/organelle/plastid
16	5	1184	1184	All/organelle/plastid	Other	All/organelle/plastid
17	10	1040	1040	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
18	4	1009	1009	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
19	2	996	996	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
20	11	985	985	All	Other	All
21	12	976	976	All	Other	All
22	8	925	925	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
23	13	836	836	All	Other	All
24	14	742	742	All	Other	All
25	15	724	724	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
26	16	645	645	All	Other	All
27	8	566	566	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
28	17	549	549	All	Other	All
29	18	506	506	All	Other	All
30	19	500	500	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
31	20	493	493	All	Other	All
32	21	409	409	All/organelle/plastid	Other	All/organelle/plastid
33	22	408	408	All	Other	All
34	23	356	356	All	Other	All
35	24	331	331	All	Other	All
36	25	314	314	All	Other	All
37	26	307	307	All/organelle/plastid	Other	All/organelle/plastid
38	27	286	286	All	Other	All
39	28	275	275	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
40	29	272	272	All/organelle/plastid	Other	All/organelle/plastid
41	30	265	265	All	Other	All
42	31	261	261	All	Other	All
43	32	255	255	All	Other	All
44	33	251	251	All	Other	All
45	34	249	249	All	Other	All
46	35	241	241	All	Other	All
47	36	236	236	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
48	37	213	213	All	Other	All
49	38	210	210	All	Other	All
50	39	207	207	All	Other	All
51	40	206	206	All	Other	All
52	41	192	192	All/organelle/plastid	Other	All/organelle/plastid
53	42	187	187	All	Other	All
54	43	180	180	All	Other	All
55	44	172	172	All	Other	All
56	45	172	172	All	Other	All
57	46	169	169	All	Other	All
58	47	161	161	All	Other	All
59	48	160	160	All	Other	All
60	49	155	155	All	Other	All
61	50	154	154	All	Other	All
62	51	149	149	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
63	52	149	149	All	Other	All
64	53	148	148	All	Other	All
65	54	148	148	All	Other	All
66	55	145	145	All	Other	All
67	56	142	142	All	Other	All
68	57	142	142	All	Other	All
69	58	138	138	All	Other	All
70	59	120	120	All	Other	All
71	60	118	118	All	Other	All
72	61	117	117	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
73	62	114	114	All/organelle/plastid	Other	All/organelle/plastid
74	63	114	114	All	Other	All
75	64	110	110	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
76	65	110	110	All	Other	All
77	66	100	100	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
78	67	99	99	All	Other	All
79	68	98	98	All	Other	All
80	69	96	96	All	Other	All
81	70	93	93	All	Other	All
82	71	90	90	All	Other	All
83	72	89	89	All	Other	All
84	73	85	85	All	Other	All
85	74	85	85	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
86	75	84	84	All	Other	All
87	76	84	84	All	Other	All
88	77	82	82	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
89	78	81	81	All	Other	All
90	79	80	80	All	Other	All
91	80	80	80	All/organelle/plastid	Other	All/organelle/plastid
92	81	80	80	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
93	82	80	80	All	Other	All
94	83	77	77	All/organelle/plastid	Other	All/organelle/plastid
95	84	76	76	All/organelle/plastid	Other	All/organelle/plastid
96	85	76	76	All/organelle/plastid	Other	All/organelle/plastid
97	86	75	75	All	Other	All
98	87	74	74	All	Other	All
99	88	73	73	All/organelle/plastid	Other	All/organelle/plastid
100	89	72	72	All	Other	All
101	90	69	69	All	Other	All
102	91	67	67	All/organelle/plastid	Other	All/organelle/plastid
103	92	67	67	All/organelle/plastid	Other	All/organelle/plastid
104	93	67	67	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
105	94	65	65	All	Other	All
106	95	60	60	All/organelle/plastid	Other	All/organelle/plastid
107	96	60	60	All	Other	All
108	97	59	59	All/organelle/plastid	Other	All/organelle/plastid
109	98	59	59	All/organelle/plastid	Other	All/organelle/plastid
110	99	59	59	All	Other	All
111	100	59	59	All	Other	All
112	101	59	59	All	Other	All
113	102	56	56	All/organelle/plastid	Other	All/organelle/plastid
114	103	56	56	All	Other	All
115	104	56	56	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
116	105	56	56	All	Other	All
117	106	56	56	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
118	107	55	55	All	Other	All
119	108	54	54	All	Other	All
120	109	54	54	All/organelle/plastid	Other	All/organelle/plastid
121	110	54	54	All	Other	All
122	111	54	54	All	Other	All
123	112	53	53	All	Other	All
124	113	52	52	All	Other	All
125	114	52	52	All/organelle/plastid	Other	All/organelle/plastid
126	115	52	52	All	Other	All
127	116	51	51	All	Other	All
128	117	50	50	All	Other	All
129	118	49	49	All	Other	All
130	119	49	49	All	Other	All
131	120	49	49	All/organelle/plastid	Other	All/organelle/plastid
132	121	47	47	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
133	122	46	46	All	Other	All
134	123	45	45	All	Other	All
135	124	45	45	All	Other	All
136	125	45	45	All	Other	All
137	126	44	44	All	Other	All
138	127	44	44	All	Other	All
139	128	43	43	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
140	129	42	42	All/organelle/plastid	Other	All/organelle/plastid
141	130	42	42	All/organelle/plastid	Other	All/organelle/plastid
142	131	42	42	All	Other	All
143	132	42	42	All	Other	All
144	133	41	41	All/organelle/plastid	Other	All/organelle/plastid
145	134	41	41	All	Other	All
146	135	40	40	All	Other	All
147	136	39	39	All	Other	All
148	137	38	38	All/organelle/plastid	Other	All/organelle/plastid
149	138	38	38	All	Other	All
150	139	38	38	All	Other	All
151	140	37	37	All	Other	All
152	141	36	36	All/organelle/plastid	Other	All/organelle/plastid
153	142	36	36	All/organelle/plastid	Other	All/organelle/plastid
154	143	36	36	All/organelle/plastid	Other	All/organelle/plastid
155	7	36	36	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
156	144	35	35	All	Other	All
157	145	35	35	All	Other	All
158	146	34	34	All/organelle/plastid	Other	All/organelle/plastid
159	147	34	34	All	Other	All
160	148	34	34	All/organelle/plastid	Other	All/organelle/plastid
161	149	33	33	All	Other	All
162	150	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
163	151	32	32	All/organelle/plastid	Other	All/organelle/plastid
164	152	32	32	All	Other	All
165	153	32	32	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
166	154	32	32	All	Other	All
167	155	31	31	All/organelle/plastid	Other	All/organelle/plastid
168	156	31	31	All	Other	All
169	157	31	31	All	Other	All
170	158	31	31	All	Other	All
171	159	31	31	All	Other	All
172	160	30	30	All	Other	All
173	161	30	30	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
174	162	30	30	All	Other	All
175	163	29	29	All	Other	All
176	164	29	29	All	Other	All
177	165	29	29	All	Other	All
178	166	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
179	167	29	29	All	Other	All
180	168	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
181	169	29	29	All	Other	All
182	170	28	28	All	Other	All
183	171	28	28	All/organelle/plastid	Other	All/organelle/plastid
184	172	28	28	All	Other	All
185	173	28	28	All	Other	All
186	174	28	28	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
187	175	28	28	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
188	176	27	27	All	Other	All
189	177	27	27	All	Other	All
190	178	27	27	All	Other	All
191	179	27	27	All	Other	All
192	180	27	27	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
193	181	27	27	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
194	182	27	27	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
195	183	27	27	All/organelle/plastid	Other	All/organelle/plastid
196	184	27	27	All/organelle/plastid	Other	All/organelle/plastid
197	185	26	26	All	Other	All
198	186	26	26	All	Other	All
199	187	26	26	All/organelle/plastid	Other	All/organelle/plastid
200	188	26	26	All/organelle/plastid	Other	All/organelle/plastid
201	189	26	26	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
202	190	26	26	All	Other	All
203	191	25	25	All/organelle/plastid	Other	All/organelle/plastid
204	192	25	25	All/organelle/plastid	Other	All/organelle/plastid
205	193	25	25	All/organelle/plastid	Other	All/organelle/plastid
206	194	25	25	All/organelle/plastid	Other	All/organelle/plastid
207	195	24	24	All	Other	All
208	196	24	24	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
209	197	24	24	All/organelle/plastid	Other	All/organelle/plastid
210	198	24	24	All/organelle/plastid	Other	All/organelle/plastid
211	199	24	24	All	Other	All
212	200	24	24	All	Other	All
213	201	24	24	All	Other	All
214	202	24	24	All	Other	All
215	203	24	24	All	Other	All
