Number_of_reads_in_clusters	89616					
Number_of_clusters	13778					
Number_of_superclusters	13763					
Number_of_singlets	158144					
Number_of_analyzed_reads	247760					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	4540	4540	All	Other	All
2	1	4229	4229	All	Other	All
3	1	3879	3879	All	Other	All
4	1	2808	2808	All	Other	All
5	4	2315	2315	All	Other	All
6	2	2276	2276	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
7	2	1609	1609	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
8	5	1440	1440	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
9	9	1301	1301	All	Other	All
10	6	1148	1148	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
11	3	1117	1117	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
12	12	1017	1017	All	Other	All
13	7	1013	1013	All	Other	All
14	3	937	937	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
15	8	921	921	All	Other	All
16	13	748	748	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
17	10	730	730	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
18	14	624	624	All	Other	All
19	3	606	606	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
20	15	575	575	All	Other	All
21	11	558	558	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
22	11	556	556	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
23	16	528	528	All	Other	All
24	6	525	525	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
25	10	499	499	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
26	5	443	443	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
27	7	438	438	All	Other	All
28	17	434	434	All	Other	All
29	8	433	433	All	Other	All
30	18	420	420	All	Other	All
31	5	390	390	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
32	19	363	363	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
33	20	348	348	All	Other	All
34	21	328	328	All	Other	All
35	22	324	324	All	Other	All
36	23	309	309	All	Other	All
37	24	302	302	All	Other	All
38	25	296	296	All	Other	All
39	26	290	290	All	Other	All
40	27	287	287	All	Other	All
41	28	280	280	All	Other	All
42	29	262	262	All	Other	All
43	30	239	239	All	Other	All
44	31	225	225	All	Other	All
45	32	220	220	All	Other	All
46	33	214	214	All	Other	All
47	34	213	213	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
48	35	211	211	All	Other	All
49	36	208	208	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
50	37	190	190	All	Other	All
51	38	188	188	All	Other	All
52	39	186	186	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
53	40	166	166	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
54	41	166	166	All	Other	All
55	42	163	163	All	Other	All
56	8	160	160	All	Other	All
57	43	153	153	All	Other	All
58	44	150	150	All	Other	All
59	45	148	148	All	Other	All
60	46	148	148	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
61	47	147	147	All	Other	All
62	48	141	141	All	Other	All
63	49	135	135	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
64	50	128	128	All	Other	All
65	51	122	122	All	Other	All
66	52	121	121	All	Other	All
67	53	118	118	All	Other	All
68	54	118	118	All	Other	All
69	55	117	117	All	Other	All
70	56	114	114	All	Other	All
71	57	112	112	All	Other	All
72	58	111	111	All	Other	All
73	59	110	110	All	Other	All
74	60	107	107	All	Other	All
75	61	106	106	All	Other	All
76	62	103	103	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
77	63	103	103	All	Other	All
78	64	101	101	All	Other	All
79	65	98	98	All	Other	All
80	66	97	97	All	Other	All
81	67	94	94	All	Other	All
82	68	94	94	All	Other	All
83	69	92	92	All	Other	All
84	70	92	92	All	Other	All
85	71	88	88	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
86	72	88	88	All	Other	All
87	73	86	86	All	Other	All
88	74	85	85	All	Other	All
89	75	85	85	All	Other	All
90	76	83	83	All	Other	All
91	77	83	83	All	Other	All
92	78	80	80	All	Other	All
93	79	79	79	All	Other	All
94	80	76	76	All	Other	All
95	81	76	76	All	Other	All
96	82	74	74	All	Other	All
97	83	74	74	All/organelle/plastid	Other	All/organelle/plastid
98	84	73	73	All/organelle/plastid	Other	All/organelle/plastid
99	85	71	71	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
100	86	71	71	All	Other	All
101	87	70	70	All	Other	All
102	88	69	69	All	Other	All
103	89	68	68	All	Other	All
104	90	68	68	All	Other	All
105	91	68	68	All	Other	All
106	7	67	67	All	Other	All
107	92	67	67	All	Other	All
108	93	67	67	All	Other	All
109	94	67	67	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
110	95	67	67	All	Other	All
111	96	66	66	All	Other	All
112	97	66	66	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
113	98	66	66	All	Other	All
114	99	66	66	All	Other	All
115	100	61	61	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
116	101	59	59	All	Other	All
117	102	59	59	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
118	103	59	59	All	Other	All
119	104	57	57	All	Other	All
120	105	57	57	All/organelle	Other	All/organelle
121	106	55	55	All	Other	All
122	107	54	54	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
123	108	54	54	All/organelle/plastid	Other	All/organelle/plastid
124	109	54	54	All	Other	All
125	110	52	52	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
126	111	51	51	All	Other	All
127	112	51	51	All	Other	All
128	113	51	51	All	Other	All
129	114	51	51	All	Other	All
130	115	49	49	All	Other	All
131	116	49	49	All	Other	All
132	117	49	49	All	Other	All
133	118	48	48	All	Other	All
134	119	47	47	All	Other	All
135	120	47	47	All	Other	All
136	121	47	47	All	Other	All
137	122	47	47	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
138	123	47	47	All	Other	All
139	124	47	47	All	Other	All
140	125	46	46	All	Other	All
141	126	45	45	All	Other	All
142	127	45	45	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
143	128	45	45	All	Other	All
144	129	45	45	All	Other	All
145	130	44	44	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
146	131	44	44	All	Other	All
147	132	44	44	All	Other	All
148	133	43	43	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
149	134	43	43	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
150	135	43	43	All	Other	All
151	136	41	41	All	Other	All
152	137	40	40	All	Other	All
153	138	40	40	All	Other	All
154	139	39	39	All	Other	All
155	140	39	39	All	Other	All
156	141	39	39	All	Other	All
157	142	38	38	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
158	143	37	37	All	Other	All
159	144	37	37	All	Other	All
160	145	37	37	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
161	146	36	36	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
162	147	36	36	All	Other	All
163	148	36	36	All	Other	All
164	149	36	36	All	Other	All
165	150	35	35	All	Other	All
166	151	35	35	All	Other	All
167	152	34	34	All	Other	All
168	153	34	34	All	Other	All
169	154	33	33	All	Other	All
170	155	33	33	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
171	156	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
172	157	32	32	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
173	158	32	32	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
174	159	31	31	All	Other	All
175	160	31	31	All	Other	All
176	161	31	31	All	Other	All
177	162	31	31	All	Other	All
178	163	30	30	All	Other	All
179	164	30	30	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
180	165	30	30	All	Other	All
181	166	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
182	167	29	29	All	Other	All
183	168	28	28	All	Other	All
184	169	28	28	All	Other	All
185	170	28	28	All	Other	All
186	171	27	27	All	Other	All
187	172	27	27	All	Other	All
188	173	27	27	All	Other	All
189	174	27	27	All	Other	All
190	175	27	27	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
191	176	27	27	All	Other	All
192	177	27	27	All	Other	All
193	178	26	26	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
194	179	26	26	All/organelle/plastid	Other	All/organelle/plastid
195	180	26	26	All	Other	All
196	181	26	26	All	Other	All
197	182	26	26	All	Other	All
198	183	25	25	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
199	184	25	25	All	Other	All
200	185	25	25	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
201	186	24	24	All	Other	All
202	187	24	24	All	Other	All
203	188	24	24	All	Other	All
204	189	24	24	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
205	190	24	24	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
