Number_of_reads_in_clusters	126124					
Number_of_clusters	21485					
Number_of_superclusters	21444					
Number_of_singlets	206396					
Number_of_analyzed_reads	332520					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	4	3720	3720	All	Other	All
2	3	3196	3196	All	Other	All
3	3	1116	1116	All	Other	All
4	1	1058	1058	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
5	9	1002	1002	All	Other	All
6	1	946	946	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
7	6	937	937	All	Other	All
8	1	915	915	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
9	1	890	890	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
10	13	863	863	All	Other	All
11	2	861	861	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
12	1	860	860	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
13	14	842	842	All	Other	All
14	8	841	841	All	Other	All
15	15	834	834	All	Other	All
16	11	829	829	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
17	16	816	816	All/repeat/satellite	Putative satellites (high confidence)	All/repeat/satellite
18	7	793	793	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
19	17	747	747	All	Other	All
20	6	746	746	All	Other	All
21	7	744	744	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
22	19	712	712	All	Other	All
23	5	704	704	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
24	6	700	700	All	Other	All
25	10	668	668	All	Other	All
26	5	667	667	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
27	18	650	650	All	Other	All
28	20	650	650	All	Other	All
29	2	648	648	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
30	22	621	621	All	Other	All
31	2	604	604	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
32	23	592	592	All	Other	All
33	24	586	586	All	Other	All
34	25	557	557	All	Other	All
35	26	555	555	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
36	27	541	541	All	Other	All
37	1	533	533	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
38	12	529	529	All	Other	All
39	28	523	523	All	Other	All
40	29	486	486	All	Other	All
41	2	477	477	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
42	21	476	476	All	Other	All
43	5	471	471	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
44	10	466	466	All	Other	All
45	31	462	462	All	Other	All
46	8	454	454	All	Putative satellites (low confidence)	All
47	2	453	453	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
48	32	449	449	All	Other	All
49	33	447	447	All	Other	All
50	2	435	435	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
51	34	430	430	All	Other	All
52	2	421	421	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
53	35	421	421	All	Other	All
54	2	404	404	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
55	36	400	400	All	Other	All
56	37	384	384	All	Other	All
57	7	384	384	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
58	2	379	379	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
59	5	365	365	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
60	5	354	354	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
61	38	353	353	All	Other	All
62	30	345	345	All	Other	All
63	39	343	343	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
64	5	338	338	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
65	7	331	331	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
66	40	329	329	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
67	41	325	325	All/organelle/plastid	Other	All/organelle/plastid
68	7	318	318	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
69	5	317	317	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
70	43	315	315	All	Other	All
71	44	312	312	All	Other	All
72	45	310	310	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
73	46	306	306	All/organelle/plastid	Other	All/organelle/plastid
74	12	301	301	All	Other	All
75	47	301	301	All	Other	All
76	8	291	291	All	Other	All
77	11	286	286	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
78	48	285	285	All	Other	All
79	49	282	282	All	Other	All
80	50	281	281	All	Other	All
81	51	278	278	All	Other	All
82	52	278	278	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
83	53	263	263	All	Other	All
84	54	254	254	All	Other	All
85	55	243	243	All	Other	All
86	6	237	237	All	Other	All
87	56	233	233	All	Other	All
88	42	232	232	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
89	9	228	228	All	Other	All
90	57	228	228	All	Other	All
91	58	228	228	All	Other	All
92	59	226	226	All	Other	All
93	60	219	219	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
94	61	208	208	All	Other	All
95	21	205	205	All	Other	All
96	62	197	197	All/organelle/plastid	Other	All/organelle/plastid
97	63	195	195	All	Other	All
98	64	194	194	All	Other	All
99	65	193	193	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand
100	66	190	190	All	Other	All
101	67	180	180	All/organelle/plastid	Other	All/organelle/plastid
102	68	180	180	All	Other	All
103	69	173	173	All	Other	All
104	70	172	172	All	Other	All
105	71	160	160	All	Other	All
106	72	151	151	All	Other	All
107	73	151	151	All	Other	All
108	74	143	143	All/organelle/plastid	Other	All/organelle/plastid
109	75	143	143	All	Other	All
110	76	135	135	All	Other	All
111	30	132	132	All	Other	All
112	77	130	130	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
113	78	130	130	All	Other	All
114	79	129	129	All/organelle/plastid	Other	All/organelle/plastid
115	80	128	128	All/organelle/plastid	Other	All/organelle/plastid
116	81	128	128	All	Other	All
117	82	124	124	All	Other	All
118	83	118	118	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
119	84	118	118	All/organelle/plastid	Other	All/organelle/plastid
120	85	116	116	All/organelle/plastid	Other	All/organelle/plastid
121	2	115	115	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
122	86	112	112	All	Other	All
123	87	111	111	All	Other	All
124	88	110	110	All/organelle/plastid	Other	All/organelle/plastid
125	89	109	109	All	Other	All
126	90	108	108	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
127	91	106	106	All/organelle/plastid	Other	All/organelle/plastid
128	92	106	106	All	Other	All
129	93	106	106	All	Other	All
130	94	104	104	All	Other	All
131	95	102	102	All	Other	All
132	96	102	102	All	Other	All
133	97	98	98	All/organelle/plastid	Other	All/organelle/plastid
134	98	98	98	All	Other	All
135	5	98	98	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
136	99	97	97	All	Other	All
137	100	97	97	All	Other	All
138	101	97	97	All	Other	All
139	102	96	96	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
140	103	94	94	All	Other	All
141	104	94	94	All	Other	All
142	105	92	92	All	Other	All
143	106	91	91	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
144	107	90	90	All	Other	All
145	108	88	88	All	Other	All
146	18	87	87	All	Other	All
147	109	86	86	All	Other	All
148	110	86	86	All	Other	All
149	111	86	86	All	Other	All
150	42	85	85	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
151	112	83	83	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
152	12	82	82	All	Other	All
153	113	82	82	All	Other	All
154	114	82	82	All	Other	All
155	115	81	81	All	Other	All
156	116	80	80	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
157	117	79	79	All	Other	All
158	118	78	78	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
159	119	78	78	All	Other	All
160	120	78	78	All	Other	All
161	121	74	74	All	Other	All
162	122	74	74	All	Other	All
163	123	73	73	All	Other	All
164	124	72	72	All	Other	All
165	125	72	72	All/organelle/plastid	Other	All/organelle/plastid
166	126	71	71	All/organelle/plastid	Other	All/organelle/plastid
167	127	70	70	All	Other	All
168	128	70	70	All	Other	All
169	129	69	69	All	Other	All
170	130	68	68	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand
171	131	68	68	All	Other	All
172	132	67	67	All	Other	All
173	133	66	66	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
174	134	66	66	All	Other	All
175	135	66	66	All	Other	All
176	136	65	65	All	Other	All
177	137	65	65	All	Other	All
178	138	64	64	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
179	139	64	64	All	Other	All
180	140	63	63	All	Other	All
181	141	59	59	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
182	142	59	59	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
183	143	58	58	All	Other	All
184	144	58	58	All	Other	All
185	145	57	57	All	Other	All
186	146	57	57	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
187	147	56	56	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
188	148	56	56	All	Other	All
189	149	55	55	All	Other	All
190	150	55	55	All	Other	All
191	151	55	55	All	Other	All
192	152	54	54	All	Other	All
193	153	53	53	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
194	154	52	52	All/organelle/plastid	Other	All/organelle/plastid
195	155	52	52	All	Other	All
196	156	51	51	All	Other	All
197	157	51	51	All	Other	All
198	158	50	50	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
199	159	50	50	All	Other	All
200	160	50	50	All	Other	All
201	161	50	50	All	Other	All
202	162	50	50	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
203	20	50	50	All	Other	All
204	163	49	49	All	Other	All
205	164	49	49	All/organelle/plastid	Other	All/organelle/plastid
206	165	48	48	All	Other	All
207	166	48	48	All/organelle/plastid	Other	All/organelle/plastid
208	167	48	48	All	Other	All
209	168	48	48	All	Other	All
210	169	48	48	All	Other	All
211	170	48	48	All	Other	All
212	171	47	47	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
213	172	47	47	All	Other	All
214	173	47	47	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
215	174	46	46	All	Other	All
216	175	45	45	All	Other	All
217	176	44	44	All	Other	All
218	177	44	44	All	Other	All
219	178	44	44	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
220	179	44	44	All	Other	All
221	180	44	44	All	Other	All
222	181	43	43	All	Other	All
223	182	43	43	All/organelle/plastid	Other	All/organelle/plastid
224	183	43	43	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
225	184	43	43	All	Other	All
226	185	43	43	All/organelle/plastid	Other	All/organelle/plastid
227	186	43	43	All	Other	All
228	187	42	42	All	Other	All
229	188	42	42	All	Other	All
230	189	42	42	All	Other	All
231	190	41	41	All	Other	All
232	191	41	41	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
233	192	41	41	All/organelle/plastid	Other	All/organelle/plastid
234	193	41	41	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
235	194	40	40	All	Other	All
236	195	40	40	All/organelle/plastid	Other	All/organelle/plastid
237	196	40	40	All	Other	All
238	197	40	40	All/organelle/plastid	Other	All/organelle/plastid
239	198	39	39	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
240	199	39	39	All	Other	All
241	200	38	38	All	Other	All
242	201	38	38	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
243	202	37	37	All	Other	All
244	203	37	37	All	Other	All
245	204	37	37	All/organelle/plastid	Other	All/organelle/plastid
246	205	37	37	All	Other	All
247	206	37	37	All	Other	All
248	207	37	37	All	Other	All
249	208	37	37	All	Other	All
250	209	37	37	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand
251	210	37	37	All	Other	All
252	211	36	36	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
253	212	36	36	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
254	213	36	36	All	Other	All
255	214	36	36	All	Other	All
256	215	36	36	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
257	216	36	36	All	Other	All
258	217	35	35	All	Other	All
259	218	35	35	All/organelle/plastid	Other	All/organelle/plastid
260	219	35	35	All	Other	All
261	220	35	35	All	Other	All
262	221	35	35	All	Other	All
263	222	35	35	All	Other	All
264	223	35	35	All	Other	All
265	224	35	35	All	Other	All
266	225	35	35	All	Other	All
267	226	35	35	All	Other	All
268	227	35	35	All	Other	All
269	228	34	34	All	Other	All
270	229	34	34	All	Other	All
271	230	34	34	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
272	231	34	34	All	Other	All
273	232	34	34	All/organelle/plastid	Other	All/organelle/plastid
274	233	34	34	All	Other	All
275	234	34	34	All	Other	All
276	235	33	33	All/organelle/plastid	Other	All/organelle/plastid
277	236	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
278	237	33	33	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand
279	238	33	33	All	Other	All
280	239	33	33	All	Other	All
281	240	33	33	All/organelle/plastid	Other	All/organelle/plastid
282	241	33	33	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
283	242	33	33	All	Other	All
284	243	33	33	All	Other	All
285	244	33	33	All	Other	All
286	245	33	33	All	Other	All
287	246	33	33	All	Other	All
