Number_of_reads_in_clusters	119532					
Number_of_clusters	17395					
Number_of_superclusters	17343					
Number_of_singlets	167348					
Number_of_analyzed_reads	286880					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	5	3129	3129	All	Other	All
2	4	1987	1987	All	Other	All
3	1	1234	1234	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
4	1	1152	1152	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
5	10	1124	1124	All	Other	All
6	1	1017	1017	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
7	8	1002	1002	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
8	1	969	969	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
9	1	964	964	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
10	3	963	963	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
11	4	962	962	All	Other	All
12	1	956	956	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
13	2	947	947	All/organelle/plastid	Other	All/organelle/plastid
14	1	936	936	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
15	2	934	934	All/organelle/plastid	Other	All/organelle/plastid
16	8	926	926	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
17	1	899	899	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
18	15	881	881	All	Putative satellites (low confidence)	All
19	2	865	865	All/organelle/plastid	Other	All/organelle/plastid
20	1	864	864	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
21	1	852	852	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
22	3	851	851	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Putative satellites (low confidence)	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
23	3	806	806	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
24	6	778	778	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
25	17	770	770	All	Other	All
26	1	769	769	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
27	9	753	753	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
28	18	746	746	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
29	11	745	745	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
30	6	741	741	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
31	19	731	731	All	Other	All
32	2	727	727	All/organelle/plastid	Other	All/organelle/plastid
33	2	703	703	All/organelle/plastid	Other	All/organelle/plastid
34	1	677	677	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
35	2	666	666	All/organelle/plastid	Other	All/organelle/plastid
36	20	658	658	All	Other	All
37	12	644	644	All/organelle/plastid	Other	All/organelle/plastid
38	7	628	628	All	Other	All
39	7	626	626	All	Other	All
40	14	622	622	All	Other	All
41	21	619	619	All	Other	All
42	22	595	595	All	Other	All
43	9	583	583	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
44	2	576	576	All/organelle/plastid	Other	All/organelle/plastid
45	24	566	566	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
46	25	522	522	All/organelle/plastid	Other	All/organelle/plastid
47	26	516	516	All	Other	All
48	6	515	515	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
49	27	501	501	All	Other	All
50	13	500	500	All	Other	All
51	6	483	483	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
52	28	477	477	All/organelle/plastid	Other	All/organelle/plastid
53	2	459	459	All/organelle/plastid	Other	All/organelle/plastid
54	29	458	458	All	Other	All
55	30	434	434	All/organelle/plastid	Other	All/organelle/plastid
56	16	432	432	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
57	2	426	426	All/organelle/plastid	Other	All/organelle/plastid
58	13	418	418	All	Other	All
59	2	418	418	All/organelle/plastid	Other	All/organelle/plastid
60	31	410	410	All/organelle/plastid	Other	All/organelle/plastid
61	32	405	405	All	Other	All
62	1	403	403	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
63	7	388	388	All	Other	All
64	33	387	387	All/organelle/plastid	Other	All/organelle/plastid
65	34	381	381	All	Other	All
66	16	380	380	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
67	35	370	370	All/organelle/plastid	Other	All/organelle/plastid
68	23	366	366	All	Other	All
69	12	365	365	All/organelle/plastid	Other	All/organelle/plastid
70	4	364	364	All	Other	All
71	2	362	362	All/organelle/plastid	Other	All/organelle/plastid
72	36	361	361	All	Other	All
73	37	354	354	All/organelle/plastid	Other	All/organelle/plastid
74	38	351	351	All/organelle/plastid	Other	All/organelle/plastid
75	10	348	348	All	Other	All
76	39	345	345	All/organelle/plastid	Other	All/organelle/plastid
77	40	333	333	All	Other	All
78	41	327	327	All	Other	All
79	42	318	318	All	Other	All
80	43	316	316	All	Other	All
81	44	313	313	All	Other	All
82	7	306	306	All	Other	All
83	2	303	303	All/organelle/plastid	Other	All/organelle/plastid
84	45	301	301	All/organelle/plastid	Other	All/organelle/plastid
85	46	299	299	All	Other	All
86	47	293	293	All/organelle/plastid	Other	All/organelle/plastid
87	48	292	292	All	Other	All
88	2	292	292	All/organelle/plastid	Other	All/organelle/plastid
89	49	288	288	All	Other	All
90	50	288	288	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
91	14	288	288	All	Other	All
92	51	284	284	All/organelle/plastid	Other	All/organelle/plastid
93	52	278	278	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
94	53	278	278	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
95	54	275	275	All/organelle/plastid	Other	All/organelle/plastid
96	11	267	267	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
97	56	266	266	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
98	57	259	259	All	Other	All
99	58	255	255	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
100	59	252	252	All/organelle/plastid	Other	All/organelle/plastid
101	60	252	252	All/organelle/plastid	Other	All/organelle/plastid
102	3	251	251	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
103	61	249	249	All/organelle/plastid	Other	All/organelle/plastid
104	62	249	249	All/organelle/plastid	Other	All/organelle/plastid
105	63	246	246	All	Other	All
106	3	240	240	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
107	64	239	239	All/organelle/plastid	Other	All/organelle/plastid
108	65	231	231	All/organelle/plastid	Other	All/organelle/plastid
109	66	230	230	All	Other	All
110	67	225	225	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
111	3	224	224	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
112	68	222	222	All/organelle/plastid	Other	All/organelle/plastid
113	2	220	220	All/organelle/plastid	Other	All/organelle/plastid
114	69	219	219	All	Other	All
115	70	215	215	All	Other	All
116	7	213	213	All	Other	All
117	71	210	210	All	Other	All
118	72	208	208	All	Other	All
119	73	207	207	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
120	23	204	204	All	Other	All
121	74	200	200	All	Other	All
122	75	199	199	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
123	76	192	192	All/organelle/plastid	Other	All/organelle/plastid
124	77	190	190	All	Other	All
125	78	184	184	All/organelle/plastid	Other	All/organelle/plastid
126	79	183	183	All/organelle/plastid	Other	All/organelle/plastid
127	80	179	179	All	Other	All
128	81	179	179	All	Other	All
129	55	177	177	All	Other	All
130	82	173	173	All/organelle/plastid	Other	All/organelle/plastid
131	83	173	173	All	Other	All
132	84	165	165	All	Other	All
133	85	159	159	All/organelle/plastid	Other	All/organelle/plastid
134	86	157	157	All/organelle/plastid	Other	All/organelle/plastid
135	87	157	157	All	Other	All
136	88	154	154	All	Other	All
137	9	153	153	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
138	89	152	152	All	Other	All
139	90	151	151	All	Other	All
140	91	148	148	All	Other	All
141	9	146	146	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
142	92	146	146	All	Other	All
143	93	145	145	All	Other	All
144	94	136	136	All	Other	All
145	95	125	125	All	Other	All
146	96	124	124	All	Other	All
147	97	124	124	All/organelle/plastid	Other	All/organelle/plastid
148	98	121	121	All	Other	All
149	99	116	116	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
150	101	103	103	All	Other	All
151	102	101	101	All	Other	All
152	103	98	98	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
153	55	92	92	All	Other	All
154	104	89	89	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
155	105	89	89	All	Other	All
156	106	87	87	All/organelle/plastid	Other	All/organelle/plastid
157	107	85	85	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
158	108	85	85	All	Other	All
159	109	78	78	All	Other	All
160	110	76	76	All	Other	All
161	111	76	76	All	Other	All
162	112	75	75	All	Other	All
163	113	74	74	All	Other	All
164	114	72	72	All	Other	All
165	115	72	72	All/organelle/plastid	Other	All/organelle/plastid
166	116	71	71	All	Other	All
167	117	70	70	All	Other	All
168	118	69	69	All	Other	All
169	119	67	67	All/organelle/plastid	Other	All/organelle/plastid
170	120	66	66	All	Other	All
171	121	66	66	All	Other	All
172	122	64	64	All	Other	All
173	123	63	63	All/organelle/plastid	Other	All/organelle/plastid
174	124	63	63	All	Other	All
175	100	62	62	All	Other	All
176	125	60	60	All	Other	All
177	126	60	60	All	Other	All
178	127	58	58	All	Other	All
179	128	58	58	All	Other	All
180	129	56	56	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
181	130	56	56	All	Other	All
182	131	56	56	All	Other	All
183	132	55	55	All	Other	All
184	133	55	55	All	Other	All
185	134	54	54	All	Other	All
186	135	54	54	All	Other	All
187	136	54	54	All	Other	All
188	137	51	51	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
189	138	51	51	All	Other	All
190	139	51	51	All	Other	All
191	140	51	51	All	Other	All
192	100	49	49	All	Other	All
193	141	49	49	All	Other	All
194	142	48	48	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
195	143	48	48	All	Other	All
196	144	47	47	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
197	145	47	47	All	Other	All
198	146	47	47	All	Other	All
199	147	46	46	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
200	148	45	45	All	Other	All
201	149	44	44	All/organelle/plastid	Other	All/organelle/plastid
202	150	43	43	All	Other	All
203	151	43	43	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
204	152	43	43	All/organelle/plastid	Other	All/organelle/plastid
205	153	41	41	All	Other	All
206	154	40	40	All	Other	All
207	155	40	40	All	Other	All
208	156	39	39	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
209	157	38	38	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
210	158	38	38	All	Other	All
211	159	36	36	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
212	160	36	36	All	Other	All
213	161	36	36	All	Other	All
214	162	36	36	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
215	163	36	36	All	Other	All
216	164	36	36	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
217	165	35	35	All	Other	All
218	166	35	35	All	Other	All
219	167	35	35	All	Other	All
220	168	35	35	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
221	169	34	34	All	Other	All
222	170	34	34	All	Other	All
223	171	33	33	All	Other	All
224	172	33	33	All	Other	All
225	173	33	33	All	Other	All
226	174	32	32	All	Other	All
227	175	32	32	All	Other	All
228	176	32	32	All	Other	All
229	177	32	32	All	Other	All
230	178	32	32	All	Other	All
231	179	31	31	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
232	180	31	31	All	Other	All
233	181	31	31	All	Other	All
234	182	31	31	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
235	183	31	31	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
236	184	30	30	All	Other	All
237	185	30	30	All	Other	All
238	186	30	30	All	Other	All
239	187	30	30	All	Other	All
240	188	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
241	189	29	29	All	Other	All
242	190	29	29	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
243	191	29	29	All	Other	All
244	192	29	29	All	Other	All
245	193	29	29	All	Other	All
246	194	28	28	All	Other	All
247	195	28	28	All	Other	All
248	196	28	28	All	Other	All
249	197	28	28	All	Other	All
250	198	28	28	All	Other	All
