Number_of_reads_in_clusters	122957					
Number_of_clusters	13599					
Number_of_superclusters	13580					
Number_of_singlets	154143					
Number_of_analyzed_reads	277100					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	8086	8086	All	Other	All
2	1	7182	7182	All	Other	All
3	1	7112	7112	All	Other	All
4	2	6203	6203	All/organelle/plastid	Other	All/organelle/plastid
5	1	5530	5530	All	Other	All
6	2	3321	3321	All/organelle/plastid	Other	All/organelle/plastid
7	2	2776	2776	All/organelle/plastid	Other	All/organelle/plastid
8	3	2728	2728	All/organelle/plastid	Other	All/organelle/plastid
9	2	2673	2673	All/organelle/plastid	Other	All/organelle/plastid
10	6	2666	2666	All	Other	All
11	4	2442	2442	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
12	2	1997	1997	All/organelle/plastid	Other	All/organelle/plastid
13	7	1519	1519	All	Other	All
14	5	1487	1487	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
15	2	1353	1353	All/organelle/plastid	Other	All/organelle/plastid
16	8	1250	1250	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
17	5	1246	1246	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
18	4	1229	1229	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
19	2	1192	1192	All/organelle/plastid	Other	All/organelle/plastid
20	3	1162	1162	All/organelle/plastid	Other	All/organelle/plastid
21	2	1090	1090	All/organelle/plastid	Other	All/organelle/plastid
22	2	1085	1085	All/organelle/plastid	Other	All/organelle/plastid
23	10	1055	1055	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
24	11	917	917	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
25	12	880	880	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
26	13	807	807	All	Other	All
27	2	793	793	All/organelle/plastid	Other	All/organelle/plastid
28	2	788	788	All/organelle/plastid	Other	All/organelle/plastid
29	14	756	756	All	Other	All
30	2	750	750	All/organelle/plastid	Other	All/organelle/plastid
31	2	673	673	All/organelle/plastid	Other	All/organelle/plastid
32	15	607	607	All	Other	All
33	9	578	578	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
34	9	564	564	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
35	16	531	531	All/organelle/plastid	Other	All/organelle/plastid
36	17	525	525	All	Other	All
37	18	490	490	All	Other	All
38	19	410	410	All	Other	All
39	20	408	408	All	Other	All
40	21	356	356	All	Other	All
41	22	348	348	All	Other	All
42	23	322	322	All	Other	All
43	24	300	300	All	Other	All
44	25	284	284	All	Other	All
45	26	281	281	All	Other	All
46	27	280	280	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
47	28	273	273	All	Other	All
48	29	270	270	All	Other	All
49	30	259	259	All	Other	All
50	31	243	243	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
51	32	241	241	All	Other	All
52	33	241	241	All	Other	All
53	34	237	237	All	Other	All
54	35	229	229	All	Other	All
55	36	222	222	All	Other	All
56	37	214	214	All	Other	All
57	38	197	197	All	Other	All
58	39	190	190	All	Other	All
59	40	186	186	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
60	41	186	186	All	Other	All
61	42	158	158	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
62	43	140	140	All	Other	All
63	44	138	138	All	Other	All
64	45	137	137	All	Other	All
65	46	135	135	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
66	47	126	126	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
67	48	126	126	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
68	49	125	125	All	Other	All
69	50	118	118	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
70	51	118	118	All	Other	All
71	52	116	116	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
72	53	113	113	All	Other	All
73	54	111	111	All	Other	All
74	55	106	106	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
75	56	104	104	All	Other	All
76	57	103	103	All	Other	All
77	58	103	103	All	Other	All
78	59	101	101	All	Other	All
79	60	98	98	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
80	61	92	92	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
81	62	89	89	All	Other	All
82	63	86	86	All	Other	All
83	64	84	84	All	Other	All
84	65	83	83	All	Other	All
85	66	83	83	All	Other	All
86	67	81	81	All	Other	All
87	68	79	79	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
88	69	78	78	All	Other	All
89	70	76	76	All	Other	All
90	71	75	75	All	Other	All
91	72	73	73	All	Other	All
92	73	72	72	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
93	74	72	72	All	Other	All
94	75	70	70	All	Other	All
95	76	70	70	All	Other	All
96	77	69	69	All	Other	All
97	78	68	68	All	Other	All
98	79	67	67	All	Other	All
99	80	67	67	All	Other	All
100	81	67	67	All	Other	All
101	82	63	63	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
102	83	63	63	All	Other	All
103	84	62	62	All	Other	All
104	85	61	61	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
105	86	60	60	All	Other	All
106	87	60	60	All	Other	All
107	88	58	58	All	Other	All
108	89	58	58	All	Other	All
109	90	58	58	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
110	91	57	57	All	Other	All
111	92	56	56	All	Other	All
112	93	56	56	All	Other	All
113	94	56	56	All	Other	All
114	95	56	56	All	Other	All
115	96	54	54	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
116	97	52	52	All	Other	All
117	98	49	49	All	Other	All
118	99	47	47	All	Other	All
119	100	46	46	All	Other	All
120	101	46	46	All	Other	All
121	102	45	45	All	Other	All
122	103	44	44	All	Other	All
123	104	43	43	All	Other	All
124	105	41	41	All	Other	All
125	106	41	41	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
126	107	39	39	All	Other	All
127	108	39	39	All	Other	All
128	109	39	39	All	Other	All
129	110	39	39	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
130	111	38	38	All	Other	All
131	112	38	38	All	Other	All
132	113	37	37	All	Other	All
133	114	37	37	All	Other	All
134	115	37	37	All	Other	All
135	116	37	37	All	Other	All
136	117	36	36	All	Other	All
137	118	35	35	All	Other	All
138	119	35	35	All	Other	All
139	120	34	34	All	Other	All
140	121	33	33	All	Other	All
141	122	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
142	123	32	32	All	Other	All
143	124	32	32	All	Other	All
144	125	32	32	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
145	126	31	31	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
146	127	31	31	All	Other	All
147	128	31	31	All	Other	All
148	129	31	31	All	Other	All
149	130	31	31	All	Other	All
150	131	31	31	All	Other	All
151	132	30	30	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
152	133	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
153	134	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
154	135	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
155	136	29	29	All	Other	All
156	137	29	29	All	Other	All
157	138	28	28	All	Other	All
158	139	28	28	All	Other	All
159	140	28	28	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
160	141	27	27	All	Other	All
161	142	27	27	All	Other	All
162	143	27	27	All	Other	All
