Number_of_reads_in_clusters	134151					
Number_of_clusters	13107					
Number_of_superclusters	13093					
Number_of_singlets	142949					
Number_of_analyzed_reads	277100					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	38241	38241	All/repeat	Putative satellites (low confidence)	All/repeat
2	1	7300	7300	All/repeat	Other	All/repeat
3	2	7190	7190	All/organelle/plastid	Other	All/organelle/plastid
4	4	4424	4424	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Putative LTR elements	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
5	3	3363	3363	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
6	2	3074	3074	All/organelle/plastid	Other	All/organelle/plastid
7	2	2506	2506	All/organelle/plastid	Other	All/organelle/plastid
8	3	2290	2290	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
9	2	2024	2024	All/organelle/plastid	Other	All/organelle/plastid
10	5	1999	1999	All	Other	All
11	6	1348	1348	All/organelle/plastid	Other	All/organelle/plastid
12	7	1315	1315	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
13	8	1264	1264	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
14	3	1132	1132	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
15	10	983	983	All	Other	All
16	11	892	892	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
17	12	884	884	All/organelle/plastid	Other	All/organelle/plastid
18	2	766	766	All/organelle/plastid	Other	All/organelle/plastid
19	14	689	689	All	Other	All
20	2	654	654	All/organelle/plastid	Other	All/organelle/plastid
21	15	596	596	All	Other	All
22	6	595	595	All/organelle/plastid	Other	All/organelle/plastid
23	16	585	585	All	Other	All
24	9	579	579	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
25	17	533	533	All	Other	All
26	9	527	527	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
27	18	512	512	All/organelle/plastid	Other	All/organelle/plastid
28	19	475	475	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
29	13	458	458	All/organelle/plastid	Other	All/organelle/plastid
30	2	430	430	All/organelle/plastid	Other	All/organelle/plastid
31	20	404	404	All	Other	All
32	21	364	364	All	Other	All
33	2	331	331	All/organelle/plastid	Other	All/organelle/plastid
34	22	319	319	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
35	23	300	300	All	Other	All
36	24	288	288	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
37	13	285	285	All/organelle/plastid	Other	All/organelle/plastid
38	25	275	275	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
39	26	267	267	All/organelle/plastid	Other	All/organelle/plastid
40	27	261	261	All	Other	All
41	28	251	251	All	Other	All
42	29	249	249	All	Other	All
43	30	233	233	All	Other	All
44	31	226	226	All	Other	All
45	32	224	224	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
46	33	217	217	All	Other	All
47	34	206	206	All	Other	All
48	35	204	204	All	Other	All
49	36	202	202	All	Other	All
50	37	190	190	All	Other	All
51	38	189	189	All	Other	All
52	39	183	183	All	Other	All
53	40	183	183	All	Other	All
54	41	175	175	All	Other	All
55	42	169	169	All	Other	All
56	43	168	168	All	Other	All
57	44	164	164	All	Other	All
58	45	158	158	All	Other	All
59	46	157	157	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
60	47	141	141	All	Other	All
61	48	137	137	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
62	49	134	134	All	Other	All
63	50	130	130	All	Other	All
64	51	129	129	All	Other	All
65	52	129	129	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
66	53	128	128	All	Other	All
67	54	124	124	All	Other	All
68	55	124	124	All	Other	All
69	56	109	109	All	Other	All
70	57	107	107	All	Other	All
71	58	107	107	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
72	59	104	104	All	Other	All
73	60	103	103	All	Other	All
74	61	100	100	All	Other	All
75	62	100	100	All	Other	All
76	63	98	98	All	Other	All
77	64	93	93	All	Other	All
78	65	88	88	All	Other	All
79	66	88	88	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
80	67	87	87	All	Other	All
81	68	87	87	All	Other	All
82	69	84	84	All	Other	All
83	70	83	83	All	Other	All
84	71	83	83	All	Other	All
85	72	81	81	All	Other	All
86	73	78	78	All	Other	All
87	74	71	71	All	Other	All
88	75	71	71	All	Other	All
89	76	70	70	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
90	77	70	70	All	Other	All
91	78	69	69	All	Other	All
92	79	62	62	All	Other	All
93	80	62	62	All	Other	All
94	81	60	60	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
95	82	60	60	All	Other	All
96	83	60	60	All	Other	All
97	84	59	59	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
98	85	58	58	All	Other	All
99	86	56	56	All	Other	All
100	87	54	54	All	Other	All
101	88	53	53	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
102	89	52	52	All	Other	All
103	90	52	52	All	Other	All
104	91	52	52	All	Other	All
105	92	52	52	All	Other	All
106	93	51	51	All	Other	All
107	94	50	50	All	Other	All
108	95	48	48	All	Other	All
109	96	46	46	All	Other	All
110	97	46	46	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
111	98	46	46	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
112	99	45	45	All	Other	All
113	100	44	44	All	Other	All
114	101	43	43	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
115	102	43	43	All	Other	All
116	9	43	43	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
117	103	42	42	All	Other	All
118	104	41	41	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
119	105	41	41	All	Other	All
120	106	40	40	All	Other	All
121	107	40	40	All	Other	All
122	108	40	40	All	Other	All
123	109	40	40	All	Other	All
124	110	39	39	All	Other	All
125	111	39	39	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
126	112	36	36	All	Other	All
127	113	35	35	All	Other	All
128	114	35	35	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
129	115	35	35	All	Other	All
130	116	34	34	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
131	117	34	34	All	Other	All
132	118	34	34	All	Other	All
133	119	34	34	All	Other	All
134	120	33	33	All	Other	All
135	121	33	33	All	Other	All
136	122	32	32	All	Other	All
137	123	32	32	All	Other	All
138	124	32	32	All	Other	All
139	125	32	32	All	Other	All
140	126	32	32	All	Other	All
141	127	31	31	All	Other	All
142	128	31	31	All	Other	All
143	129	30	30	All	Other	All
144	130	30	30	All	Other	All
145	131	29	29	All	Other	All
146	132	29	29	All	Other	All
147	133	28	28	All	Other	All
148	134	28	28	All	Other	All
149	135	28	28	All	Other	All
150	136	28	28	All	Other	All
151	137	27	27	All	Other	All
