Number_of_reads_in_clusters	137183					
Number_of_clusters	11922					
Number_of_superclusters	11907					
Number_of_singlets	139917					
Number_of_analyzed_reads	277100					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	41910	41910	All/repeat	Putative satellites (low confidence)	All/repeat
2	1	7630	7630	All/repeat	Other	All/repeat
3	2	6064	6064	All/organelle/plastid	Other	All/organelle/plastid
4	3	5005	5005	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
5	4	4299	4299	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Putative LTR elements	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
6	3	3512	3512	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
7	2	3327	3327	All/organelle/plastid	Other	All/organelle/plastid
8	2	2686	2686	All/organelle/plastid	Other	All/organelle/plastid
9	2	2444	2444	All/organelle/plastid	Other	All/organelle/plastid
10	2	1889	1889	All/organelle/plastid	Other	All/organelle/plastid
11	6	1829	1829	All	Other	All
12	3	1609	1609	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
13	5	1578	1578	All/organelle/plastid	Other	All/organelle/plastid
14	7	1233	1233	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
15	8	1126	1126	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
16	2	932	932	All/organelle/plastid	Other	All/organelle/plastid
17	9	929	929	All	Other	All
18	10	921	921	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
19	5	832	832	All/organelle/plastid	Other	All/organelle/plastid
20	2	794	794	All/organelle/plastid	Other	All/organelle/plastid
21	11	782	782	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
22	12	584	584	All	Other	All
23	13	495	495	All	Other	All
24	14	480	480	All	Other	All
25	2	444	444	All/organelle/plastid	Other	All/organelle/plastid
26	16	439	439	All	Other	All
27	15	362	362	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
28	17	356	356	All	Other	All
29	18	352	352	All	Other	All
30	19	351	351	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
31	20	346	346	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
32	21	329	329	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
33	22	317	317	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
34	23	305	305	All	Other	All
35	2	278	278	All/organelle/plastid	Other	All/organelle/plastid
36	25	260	260	All	Other	All
37	26	249	249	All	Other	All
38	27	247	247	All	Other	All
39	28	242	242	All	Other	All
40	29	242	242	All	Other	All
41	30	232	232	All	Other	All
42	31	225	225	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
43	7	222	222	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
44	32	221	221	All	Other	All
45	33	217	217	All	Other	All
46	34	197	197	All	Other	All
47	35	197	197	All	Other	All
48	36	178	178	All	Other	All
49	37	168	168	All	Other	All
50	24	164	164	All/organelle/plastid	Other	All/organelle/plastid
51	38	162	162	All	Other	All
52	39	162	162	All	Other	All
53	40	157	157	All	Other	All
54	41	156	156	All	Other	All
55	42	138	138	All	Other	All
56	43	135	135	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
57	44	132	132	All	Other	All
58	45	131	131	All	Other	All
59	46	129	129	All	Other	All
60	47	128	128	All	Other	All
61	48	126	126	All	Other	All
62	49	113	113	All	Other	All
63	50	113	113	All	Other	All
64	51	108	108	All	Other	All
65	52	108	108	All	Other	All
66	24	100	100	All/organelle/plastid	Other	All/organelle/plastid
67	53	98	98	All	Other	All
68	54	97	97	All	Other	All
69	55	94	94	All	Other	All
70	56	94	94	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
71	57	91	91	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
72	58	90	90	All	Other	All
73	15	89	89	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
74	59	87	87	All	Other	All
75	60	84	84	All	Other	All
76	61	84	84	All	Other	All
77	62	81	81	All	Other	All
78	63	80	80	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
79	64	77	77	All	Other	All
80	65	76	76	All	Other	All
81	66	75	75	All	Other	All
82	67	75	75	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
83	68	74	74	All	Other	All
84	69	73	73	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
85	70	73	73	All	Other	All
86	71	72	72	All	Other	All
87	72	72	72	All	Other	All
88	73	71	71	All	Other	All
89	74	71	71	All	Other	All
90	75	71	71	All	Other	All
91	76	69	69	All	Other	All
92	77	68	68	All/organelle/plastid	Other	All/organelle/plastid
93	78	66	66	All	Other	All
94	79	65	65	All	Other	All
95	80	62	62	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
96	81	62	62	All	Other	All
97	82	60	60	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
98	83	57	57	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
99	84	57	57	All	Other	All
100	85	56	56	All	Other	All
101	86	56	56	All	Other	All
102	87	55	55	All	Other	All
103	88	54	54	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
104	89	52	52	All	Other	All
105	90	52	52	All	Other	All
106	91	52	52	All	Other	All
107	92	52	52	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
108	93	52	52	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
109	94	50	50	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
110	95	50	50	All	Other	All
111	96	47	47	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
112	97	46	46	All	Other	All
113	98	45	45	All	Other	All
114	99	45	45	All	Other	All
115	100	43	43	All	Other	All
116	101	43	43	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
117	102	43	43	All	Other	All
118	103	42	42	All	Other	All
119	104	42	42	All	Other	All
120	105	41	41	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
121	106	41	41	All	Other	All
122	107	41	41	All	Other	All
123	108	39	39	All	Other	All
124	109	39	39	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
125	110	39	39	All	Other	All
126	111	39	39	All	Other	All
127	112	38	38	All	Other	All
128	113	38	38	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
129	114	37	37	All	Other	All
130	115	37	37	All	Other	All
131	116	37	37	All	Other	All
132	117	37	37	All	Other	All
133	118	36	36	All	Other	All
134	119	36	36	All	Other	All
135	120	35	35	All	Other	All
136	121	34	34	All	Other	All
137	122	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
138	123	33	33	All	Other	All
139	124	32	32	All	Other	All
140	125	32	32	All	Other	All
141	126	32	32	All	Other	All
142	127	32	32	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
143	128	32	32	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
144	129	31	31	All	Other	All
145	130	31	31	All/repeat/mobile_element/Class_I/LTR/Ty1_copia	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia
146	131	31	31	All	Other	All
147	132	30	30	All	Other	All
148	133	30	30	All	Other	All
149	134	30	30	All	Other	All
150	135	29	29	All	Other	All
151	136	29	29	All	Other	All
152	137	29	29	All	Other	All
153	138	28	28	All	Other	All
154	139	28	28	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
155	140	28	28	All	Other	All
156	141	27	27	All	Other	All
157	142	27	27	All	Other	All
158	143	27	27	All	Other	All
159	144	27	27	All	Other	All
160	145	27	27	All	Other	All
161	146	27	27	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
162	147	27	27	All	Other	All
163	148	27	27	All	Other	All
