Number_of_reads_in_clusters	86003					
Number_of_clusters	13031					
Number_of_superclusters	13019					
Number_of_singlets	155237					
Number_of_analyzed_reads	241240					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	5164	5164	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
2	1	5021	5021	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
3	5	2668	2668	All	Other	All
4	1	2601	2601	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
5	3	2084	2084	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
6	4	1460	1460	All	Other	All
7	3	1311	1311	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/chromovirus/Tekay
8	9	1254	1254	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
9	2	1245	1245	All/repeat/rDNA/45S_rDNA	Putative satellites (low confidence)	All/repeat/rDNA/45S_rDNA
10	7	1143	1143	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
11	8	1090	1090	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
12	2	1038	1038	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
13	2	1024	1024	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
14	2	973	973	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
15	6	962	962	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
16	10	909	909	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
17	6	886	886	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
18	4	833	833	All	Other	All
19	11	786	786	All	Other	All
20	2	741	741	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
21	12	733	733	All	Other	All
22	7	704	704	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
23	13	697	697	All	Other	All
24	14	602	602	All	Other	All
25	15	514	514	All	Other	All
26	16	482	482	All	Other	All
27	17	482	482	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
28	18	460	460	All	Other	All
29	19	422	422	All	Other	All
30	4	391	391	All	Other	All
31	20	384	384	All	Other	All
32	8	382	382	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
33	21	357	357	All	Other	All
34	22	346	346	All	Other	All
35	23	343	343	All	Other	All
36	24	335	335	All	Other	All
37	25	318	318	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
38	26	306	306	All	Other	All
39	27	296	296	All	Other	All
40	28	281	281	All	Other	All
41	29	281	281	All	Other	All
42	30	280	280	All	Other	All
43	31	278	278	All	Other	All
44	32	264	264	All	Other	All
45	33	250	250	All	Other	All
46	34	239	239	All	Other	All
47	35	230	230	All	Other	All
48	36	223	223	All	Other	All
49	37	219	219	All	Other	All
50	38	214	214	All	Other	All
51	39	208	208	All	Other	All
52	40	203	203	All	Other	All
53	41	199	199	All	Other	All
54	42	199	199	All	Other	All
55	43	196	196	All	Other	All
56	44	193	193	All	Other	All
57	45	166	166	All	Other	All
58	46	158	158	All	Other	All
59	47	156	156	All	Other	All
60	48	152	152	All	Other	All
61	49	151	151	All	Other	All
62	50	149	149	All	Other	All
63	51	149	149	All	Other	All
64	52	147	147	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
65	53	135	135	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
66	54	133	133	All	Other	All
67	55	132	132	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
68	56	130	130	All	Other	All
69	57	122	122	All	Other	All
70	58	122	122	All	Other	All
71	59	120	120	All	Other	All
72	60	119	119	All	Other	All
73	61	115	115	All	Other	All
74	62	112	112	All	Other	All
75	63	105	105	All	Other	All
76	64	104	104	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
77	65	103	103	All	Other	All
78	66	103	103	All	Other	All
79	67	102	102	All	Other	All
80	68	99	99	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
81	69	94	94	All	Other	All
82	70	93	93	All	Other	All
83	71	91	91	All	Other	All
84	72	91	91	All	Other	All
85	73	85	85	All	Other	All
86	74	85	85	All	Other	All
87	75	83	83	All	Other	All
88	76	82	82	All	Other	All
89	77	81	81	All	Other	All
90	78	80	80	All	Other	All
91	79	77	77	All	Other	All
92	80	75	75	All	Other	All
93	81	75	75	All	Other	All
94	82	75	75	All	Other	All
95	83	75	75	All	Other	All
96	84	69	69	All	Other	All
97	85	69	69	All	Other	All
98	86	67	67	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
99	87	66	66	All	Other	All
100	88	66	66	All	Other	All
101	89	65	65	All	Other	All
102	90	64	64	All	Other	All
103	91	62	62	All	Other	All
104	92	62	62	All	Other	All
105	93	62	62	All	Other	All
106	94	61	61	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
107	95	61	61	All	Other	All
108	96	59	59	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
109	97	55	55	All	Other	All
110	98	55	55	All	Other	All
111	99	54	54	All	Other	All
112	100	53	53	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
113	101	52	52	All	Other	All
114	102	51	51	All	Other	All
115	103	50	50	All	Other	All
116	104	50	50	All	Other	All
117	105	49	49	All	Other	All
118	106	48	48	All	Other	All
119	107	48	48	All	Other	All
120	108	48	48	All	Other	All
121	109	46	46	All	Other	All
122	110	43	43	All	Other	All
123	111	42	42	All	Other	All
124	112	41	41	All	Other	All
125	113	39	39	All	Other	All
126	114	38	38	All	Other	All
127	115	37	37	All	Other	All
128	116	36	36	All	Other	All
129	117	36	36	All	Other	All
130	118	35	35	All	Other	All
131	119	35	35	All	Other	All
132	120	35	35	All	Other	All
133	121	34	34	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
134	122	33	33	All	Other	All
135	123	33	33	All	Other	All
136	124	33	33	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
137	125	33	33	All	Other	All
138	126	33	33	All	Other	All
139	127	33	33	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
140	128	32	32	All	Other	All
141	129	32	32	All	Other	All
142	130	31	31	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
143	131	31	31	All	Other	All
144	132	31	31	All	Other	All
145	133	30	30	All	Other	All
146	134	29	29	All	Other	All
147	135	29	29	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Tork
148	136	29	29	All	Other	All
149	137	29	29	All	Other	All
150	138	29	29	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
151	139	29	29	All	Other	All
152	140	28	28	All	Other	All
153	141	27	27	All	Other	All
154	142	27	27	All	Other	All
155	143	27	27	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
156	144	26	26	All	Other	All
157	145	26	26	All	Other	All
158	146	26	26	All	Other	All
159	147	25	25	All	Other	All
160	148	25	25	All	Other	All
161	149	25	25	All	Other	All
162	150	25	25	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
163	151	25	25	All	Other	All
164	152	25	25	All	Other	All
165	153	24	24	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/SIRE
166	154	24	24	All	Other	All
167	155	24	24	All	Other	All
168	156	24	24	All	Other	All
169	157	24	24	All	Other	All
170	158	24	24	All	Other	All
171	159	24	24	All	Other	All
