Number_of_reads_in_clusters	78238					
Number_of_clusters	13905					
Number_of_superclusters	13889					
Number_of_singlets	163002					
Number_of_analyzed_reads	241240					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	1	3826	3826	All/repeat	Putative satellites (low confidence)	All/repeat
2	1	3021	3021	All/repeat	Other	All/repeat
3	1	2966	2966	All/repeat	Other	All/repeat
4	3	2045	2045	All	Other	All
5	2	1100	1100	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
6	4	1054	1054	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
7	2	998	998	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
8	9	820	820	All	Other	All
9	2	783	783	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
10	6	747	747	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
11	7	735	735	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
12	2	673	673	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
13	11	669	669	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana	Putative LTR elements	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ivana
14	5	658	658	All/organelle/plastid	Other	All/organelle/plastid
15	2	646	646	All/repeat/rDNA/45S_rDNA	Other	All/repeat/rDNA/45S_rDNA
16	4	595	595	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Putative satellites (low confidence)	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
17	10	564	564	All	Other	All
18	13	559	559	All	Other	All
19	14	552	552	All	Other	All
20	15	531	531	All	Other	All
21	5	525	525	All/organelle/plastid	Other	All/organelle/plastid
22	16	514	514	All	Other	All
23	8	504	504	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
24	17	499	499	All	Other	All
25	18	455	455	All	Other	All
26	12	449	449	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
27	8	436	436	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
28	19	405	405	All	Other	All
29	20	404	404	All	Other	All
30	21	336	336	All/organelle/plastid	Other	All/organelle/plastid
31	22	328	328	All	Other	All
32	7	324	324	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
33	23	300	300	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
34	24	285	285	All	Other	All
35	25	282	282	All	Other	All
36	26	281	281	All	Other	All
37	27	279	279	All	Other	All
38	28	278	278	All/organelle/plastid	Other	All/organelle/plastid
39	29	276	276	All/organelle/plastid	Other	All/organelle/plastid
40	30	274	274	All	Other	All
41	31	253	253	All	Other	All
42	32	247	247	All	Other	All
43	33	242	242	All	Other	All
44	34	240	240	All	Other	All
45	35	236	236	All	Other	All
46	4	236	236	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
47	36	232	232	All	Other	All
48	10	227	227	All	Other	All
49	37	221	221	All	Other	All
50	6	221	221	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
51	5	221	221	All/organelle/plastid	Other	All/organelle/plastid
52	38	189	189	All	Other	All
53	39	178	178	All	Other	All
54	40	178	178	All	Other	All
55	41	165	165	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
56	42	165	165	All	Other	All
57	43	165	165	All	Other	All
58	44	160	160	All	Other	All
59	45	160	160	All	Other	All
60	46	154	154	All/organelle/plastid	Other	All/organelle/plastid
61	47	150	150	All/organelle/plastid	Other	All/organelle/plastid
62	48	149	149	All	Other	All
63	49	147	147	All	Other	All
64	6	145	145	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
65	50	139	139	All	Other	All
66	51	136	136	All	Other	All
67	52	136	136	All	Other	All
68	53	125	125	All	Other	All
69	54	121	121	All/organelle/plastid	Other	All/organelle/plastid
70	12	119	119	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
71	55	110	110	All	Other	All
72	56	107	107	All/organelle/plastid	Other	All/organelle/plastid
73	57	105	105	All	Other	All
74	58	101	101	All	Other	All
75	59	101	101	All	Other	All
76	60	100	100	All	Other	All
77	61	98	98	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
78	62	97	97	All	Other	All
79	63	95	95	All	Other	All
80	64	94	94	All	Other	All
81	65	94	94	All	Other	All
82	66	92	92	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
83	67	91	91	All	Other	All
84	68	90	90	All	Other	All
85	69	90	90	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
86	70	86	86	All	Other	All
87	71	86	86	All	Other	All
88	72	86	86	All	Other	All
89	73	82	82	All/organelle/plastid	Other	All/organelle/plastid
90	74	81	81	All	Other	All
91	75	81	81	All/organelle/plastid	Other	All/organelle/plastid
92	76	79	79	All	Other	All
93	77	77	77	All/organelle/plastid	Other	All/organelle/plastid
94	78	77	77	All	Other	All
95	79	76	76	All	Other	All
96	80	76	76	All	Other	All
97	81	73	73	All	Other	All
98	82	73	73	All	Other	All
99	83	72	72	All	Other	All
100	84	70	70	All	Other	All
101	85	69	69	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
102	86	69	69	All	Other	All
103	87	67	67	All	Other	All
104	88	67	67	All	Other	All
105	89	67	67	All	Other	All
106	90	67	67	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
107	91	66	66	All	Other	All
108	92	66	66	All/organelle/plastid	Other	All/organelle/plastid
109	93	62	62	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
110	94	59	59	All	Other	All
111	95	59	59	All/organelle/plastid	Other	All/organelle/plastid
112	96	58	58	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
113	97	58	58	All/organelle/plastid	Other	All/organelle/plastid
114	98	57	57	All/organelle/plastid	Other	All/organelle/plastid
115	99	57	57	All	Other	All
116	100	56	56	All/organelle/plastid	Other	All/organelle/plastid
117	101	55	55	All	Other	All
118	102	55	55	All	Other	All
119	103	55	55	All	Other	All
120	104	53	53	All/organelle/plastid	Other	All/organelle/plastid
121	105	52	52	All/organelle/plastid	Other	All/organelle/plastid
122	106	50	50	All/organelle/plastid	Other	All/organelle/plastid
123	107	48	48	All	Other	All
124	108	47	47	All	Other	All
125	109	45	45	All	Other	All
126	110	45	45	All/organelle/plastid	Other	All/organelle/plastid
127	111	44	44	All	Other	All
128	112	44	44	All/organelle/plastid	Other	All/organelle/plastid
129	113	44	44	All	Other	All
130	114	43	43	All	Other	All
131	115	43	43	All/organelle/plastid	Other	All/organelle/plastid
132	116	42	42	All	Other	All
133	117	42	42	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
134	118	40	40	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
135	119	40	40	All	Other	All
136	120	39	39	All	Other	All
137	121	38	38	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
138	122	38	38	All	Other	All
139	123	38	38	All	Other	All
140	124	38	38	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
141	125	38	38	All/organelle/plastid	Other	All/organelle/plastid
142	126	38	38	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
143	127	37	37	All/organelle/plastid	Other	All/organelle/plastid
144	128	37	37	All	Other	All
145	129	37	37	All/organelle/plastid	Other	All/organelle/plastid
146	130	37	37	All	Other	All
147	131	37	37	All	Other	All
148	132	37	37	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
149	133	37	37	All	Other	All
150	134	36	36	All/organelle/plastid	Other	All/organelle/plastid
151	135	36	36	All	Other	All
152	136	36	36	All	Other	All
153	137	35	35	All	Other	All
154	138	35	35	All	Other	All
155	139	34	34	All/organelle/plastid	Other	All/organelle/plastid
156	140	34	34	All/organelle/plastid	Other	All/organelle/plastid
157	141	34	34	All	Other	All
158	142	34	34	All	Other	All
159	143	34	34	All	Other	All
160	144	34	34	All/organelle/plastid	Other	All/organelle/plastid
161	145	33	33	All	Other	All
162	146	33	33	All	Other	All
163	147	33	33	All	Other	All
164	148	33	33	All/organelle/plastid	Other	All/organelle/plastid
165	149	33	33	All	Other	All
166	150	32	32	All	Other	All
167	151	32	32	All/organelle/plastid	Other	All/organelle/plastid
168	152	32	32	All	Other	All
169	153	32	32	All/organelle/plastid	Other	All/organelle/plastid
170	154	31	31	All	Other	All
171	155	31	31	All/organelle/plastid	Other	All/organelle/plastid
172	156	31	31	All	Other	All
173	157	30	30	All	Other	All
174	158	30	30	All	Other	All
175	159	29	29	All	Other	All
176	160	29	29	All	Other	All
177	161	29	29	All/organelle/plastid	Other	All/organelle/plastid
178	162	28	28	All	Other	All
179	163	28	28	All	Other	All
180	164	28	28	All/organelle/plastid	Other	All/organelle/plastid
181	165	28	28	All/organelle/plastid	Other	All/organelle/plastid
182	166	27	27	All/organelle/plastid	Other	All/organelle/plastid
183	167	27	27	All	Other	All
184	168	27	27	All	Other	All
185	169	27	27	All	Other	All
186	170	27	27	All/organelle/plastid	Other	All/organelle/plastid
187	171	27	27	All	Other	All
188	172	27	27	All/organelle/plastid	Other	All/organelle/plastid
189	173	27	27	All	Other	All
190	174	27	27	All	Other	All
191	175	26	26	All	Other	All
192	176	26	26	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
193	177	26	26	All/organelle/plastid	Other	All/organelle/plastid
194	178	26	26	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
195	179	26	26	All	Other	All
196	180	25	25	All/organelle/plastid	Other	All/organelle/plastid
197	181	25	25	All	Other	All
198	182	25	25	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
199	183	25	25	All/organelle/plastid	Other	All/organelle/plastid
200	184	25	25	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
201	185	25	25	All	Other	All
202	186	25	25	All	Other	All
203	187	24	24	All/organelle/plastid	Other	All/organelle/plastid
204	188	24	24	All	Other	All
205	189	24	24	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Bianca
206	190	24	24	All	Other	All
207	191	24	24	All	Other	All
208	192	24	24	All	Other	All
209	193	24	24	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
