Number_of_reads_in_clusters	67380					
Number_of_clusters	11566					
Number_of_superclusters	11535					
Number_of_singlets	141260					
Number_of_analyzed_reads	208640					
						
Cluster	Supercluster	Size	Size_adjusted	Automatic_annotation	TAREAN_annotation	Final_annotation
1	6	961	961	All	Other	All
2	7	903	903	All	Other	All
3	2	733	733	All	Other	All
4	11	661	661	All	Other	All
5	12	646	646	All	Other	All
6	1	625	625	All/organelle/plastid	Other	All/organelle/plastid
7	1	611	611	All/organelle/plastid	Other	All/organelle/plastid
8	14	582	582	All	Other	All
9	3	581	581	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
10	2	540	540	All	Other	All
11	13	539	539	All	Other	All
12	3	519	519	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
13	5	512	512	All	Other	All
14	5	482	482	All	Other	All
15	15	478	478	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/hAT
16	18	438	438	All	Other	All
17	19	427	427	All	Other	All
18	20	425	425	All	Other	All
19	3	423	423	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
20	9	421	421	All/organelle/plastid	Other	All/organelle/plastid
21	1	366	366	All/organelle/plastid	Other	All/organelle/plastid
22	8	366	366	All/repeat/rDNA/45S_rDNA/25S_rDNA	Other	All/repeat/rDNA/45S_rDNA/25S_rDNA
23	1	361	361	All/organelle/plastid	Other	All/organelle/plastid
24	9	361	361	All/organelle/plastid	Other	All/organelle/plastid
25	1	356	356	All/organelle/plastid	Other	All/organelle/plastid
26	22	354	354	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
27	23	354	354	All	Other	All
28	24	353	353	All/repeat/satellite	Putative satellites (low confidence)	All/repeat/satellite
29	1	351	351	All/organelle/plastid	Other	All/organelle/plastid
30	25	343	343	All	Other	All
31	8	341	341	All/repeat/rDNA/45S_rDNA/25S_rDNA	Other	All/repeat/rDNA/45S_rDNA/25S_rDNA
32	17	339	339	All/repeat	Putative satellites (low confidence)	All/repeat
33	2	339	339	All	Other	All
34	26	336	336	All/organelle/plastid	Other	All/organelle/plastid
35	27	335	335	All	Other	All
36	4	330	330	All	Other	All
37	28	325	325	All/organelle/plastid	Other	All/organelle/plastid
38	21	325	325	All	Other	All
39	16	320	320	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
40	10	310	310	All/repeat/rDNA/45S_rDNA/18S_rDNA	Other	All/repeat/rDNA/45S_rDNA/18S_rDNA
41	29	308	308	All	Other	All
42	1	303	303	All/organelle/plastid	Other	All/organelle/plastid
43	30	301	301	All/repeat/mobile_element/Class_I/LTR	Other	All/repeat/mobile_element/Class_I/LTR
44	31	300	300	All/organelle/plastid	Other	All/organelle/plastid
45	32	298	298	All	Other	All
46	33	295	295	All	Other	All
47	34	292	292	All/organelle/plastid	Other	All/organelle/plastid
48	35	286	286	All	Other	All
49	36	282	282	All/organelle/plastid	Other	All/organelle/plastid
50	37	265	265	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
51	10	251	251	All/repeat/rDNA/45S_rDNA/18S_rDNA	Other	All/repeat/rDNA/45S_rDNA/18S_rDNA
52	4	249	249	All	Other	All
53	38	248	248	All	Other	All
54	39	246	246	All	Other	All
55	40	233	233	All/organelle/plastid	Other	All/organelle/plastid
56	4	229	229	All	Other	All
57	41	224	224	All/organelle/plastid	Other	All/organelle/plastid
58	42	224	224	All/organelle/plastid	Other	All/organelle/plastid
59	43	224	224	All/organelle/plastid	Other	All/organelle/plastid
60	44	219	219	All	Other	All
61	45	203	203	All/organelle/plastid	Other	All/organelle/plastid
62	46	200	200	All	Other	All
63	47	199	199	All/repeat/rDNA/45S_rDNA/25S_rDNA	Other	All/repeat/rDNA/45S_rDNA/25S_rDNA
64	4	191	191	All	Other	All
65	48	186	186	All	Other	All
66	1	185	185	All/organelle/plastid	Other	All/organelle/plastid
67	49	185	185	All/organelle/plastid	Other	All/organelle/plastid
68	50	178	178	All/organelle/plastid	Other	All/organelle/plastid
69	51	178	178	All	Other	All
70	52	177	177	All	Other	All
71	53	176	176	All/organelle/plastid	Other	All/organelle/plastid
72	54	176	176	All/organelle/plastid	Other	All/organelle/plastid
73	1	175	175	All/organelle/plastid	Other	All/organelle/plastid
74	55	174	174	All	Other	All
75	56	172	172	All/organelle/plastid	Other	All/organelle/plastid
76	57	172	172	All/organelle/plastid	Other	All/organelle/plastid
77	58	168	168	All/organelle/plastid	Other	All/organelle/plastid
78	59	168	168	All/organelle/plastid	Other	All/organelle/plastid
79	60	166	166	All	Other	All
80	61	165	165	All	Other	All
81	62	161	161	All/organelle/plastid	Other	All/organelle/plastid
82	63	160	160	All/organelle/plastid	Other	All/organelle/plastid
83	64	158	158	All/organelle/plastid	Other	All/organelle/plastid
84	65	151	151	All/organelle/plastid	Other	All/organelle/plastid
85	66	148	148	All/organelle/plastid	Other	All/organelle/plastid
86	67	145	145	All/organelle/plastid	Other	All/organelle/plastid
87	68	141	141	All	Other	All
88	69	140	140	All	Other	All
89	70	133	133	All/organelle/plastid	Other	All/organelle/plastid
90	71	133	133	All	Other	All
91	72	132	132	All/organelle/plastid	Other	All/organelle/plastid
92	73	130	130	All/organelle/plastid	Other	All/organelle/plastid
93	74	129	129	All	Other	All
94	75	128	128	All	Other	All
95	1	127	127	All/organelle/plastid	Other	All/organelle/plastid
96	76	125	125	All/organelle/plastid	Other	All/organelle/plastid
97	77	125	125	All	Other	All
98	78	125	125	All/organelle/plastid	Other	All/organelle/plastid
99	79	124	124	All/organelle/plastid	Other	All/organelle/plastid
100	80	122	122	All	Other	All
101	81	119	119	All	Other	All
102	16	119	119	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/EnSpm_CACTA
103	82	119	119	All/organelle/plastid	Other	All/organelle/plastid
104	83	118	118	All/organelle/plastid	Other	All/organelle/plastid
105	84	117	117	All	Other	All
106	1	116	116	All/organelle/plastid	Other	All/organelle/plastid
107	85	115	115	All/organelle/plastid	Other	All/organelle/plastid
108	86	115	115	All/organelle/plastid	Other	All/organelle/plastid
109	87	115	115	All	Other	All
110	88	114	114	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
111	89	114	114	All/organelle/plastid	Other	All/organelle/plastid
112	90	113	113	All	Other	All
113	91	112	112	All	Other	All
114	92	111	111	All	Other	All
115	93	110	110	All	Other	All
116	94	109	109	All	Other	All
117	95	107	107	All	Other	All
118	96	106	106	All	Other	All
119	1	106	106	All/organelle/plastid	Other	All/organelle/plastid
120	97	105	105	All/organelle/plastid	Other	All/organelle/plastid
121	10	105	105	All/repeat/rDNA/45S_rDNA/18S_rDNA	Other	All/repeat/rDNA/45S_rDNA/18S_rDNA
122	98	102	102	All/organelle/plastid	Other	All/organelle/plastid
123	99	100	100	All/organelle/plastid	Other	All/organelle/plastid
124	100	100	100	All/organelle/plastid	Other	All/organelle/plastid
125	17	99	99	All/repeat	Other	All/repeat
126	101	96	96	All	Other	All
127	13	94	94	All	Other	All
128	102	91	91	All/organelle/plastid	Other	All/organelle/plastid
129	103	90	90	All	Other	All
130	8	89	89	All/repeat/rDNA/45S_rDNA/25S_rDNA	Other	All/repeat/rDNA/45S_rDNA/25S_rDNA
131	104	88	88	All	Other	All
132	4	87	87	All	Other	All
133	105	86	86	All/organelle/plastid	Other	All/organelle/plastid
134	106	85	85	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
135	107	84	84	All/organelle/plastid	Other	All/organelle/plastid
136	108	82	82	All/organelle/plastid	Other	All/organelle/plastid
137	109	82	82	All	Other	All
138	110	81	81	All/organelle/plastid	Other	All/organelle/plastid
139	111	81	81	All	Other	All
140	112	81	81	All/organelle/plastid	Other	All/organelle/plastid
141	113	81	81	All/organelle/plastid	Other	All/organelle/plastid
142	114	79	79	All	Other	All
143	115	75	75	All	Other	All
144	116	74	74	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
145	117	70	70	All	Other	All
146	21	67	67	All	Other	All
147	118	67	67	All	Other	All
148	119	66	66	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
149	120	66	66	All	Other	All
150	121	66	66	All	Other	All
151	122	65	65	All	Other	All
152	123	65	65	All	Other	All
153	124	64	64	All	Other	All
154	125	64	64	All	Other	All
155	126	63	63	All/organelle/plastid	Other	All/organelle/plastid
156	127	63	63	All	Other	All
157	128	63	63	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ikeros
158	129	62	62	All/organelle/plastid	Other	All/organelle/plastid
159	130	61	61	All	Other	All
160	131	61	61	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
161	132	60	60	All/organelle/plastid	Other	All/organelle/plastid
162	133	60	60	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
163	134	59	59	All	Other	All
164	135	59	59	All/organelle/plastid	Other	All/organelle/plastid
165	136	57	57	All/organelle/plastid	Other	All/organelle/plastid
166	137	55	55	All	Other	All
167	138	55	55	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
168	139	53	53	All	Other	All
169	5	52	52	All	Other	All
170	140	52	52	All	Other	All
171	141	50	50	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
172	142	50	50	All	Other	All
173	143	50	50	All	Other	All
174	144	50	50	All	Other	All
175	145	49	49	All/organelle/plastid	Other	All/organelle/plastid
176	146	49	49	All	Other	All
177	147	48	48	All/organelle/plastid	Other	All/organelle/plastid
178	148	47	47	All/organelle/plastid	Other	All/organelle/plastid
179	149	47	47	All	Other	All
180	150	45	45	All	Other	All
181	151	44	44	All/organelle	Other	All/organelle
182	152	44	44	All	Other	All
183	153	44	44	All	Other	All
184	154	43	43	All	Other	All
185	155	43	43	All	Other	All
186	156	43	43	All	Other	All
187	157	42	42	All/organelle/plastid	Other	All/organelle/plastid
188	158	42	42	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
189	159	42	42	All	Other	All
190	160	42	42	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
191	161	41	41	All	Other	All
192	162	41	41	All/organelle/plastid	Other	All/organelle/plastid
193	163	41	41	All	Other	All
194	164	40	40	All/repeat/rDNA/5S_rDNA	rDNA	All/repeat/rDNA/5S_rDNA
195	165	40	40	All	Other	All
196	166	39	39	All	Other	All
197	167	36	36	All	Other	All
198	168	36	36	All	Other	All
199	169	36	36	All	Other	All
200	170	36	36	All/organelle/plastid	Other	All/organelle/plastid
201	171	35	35	All/organelle/plastid	Other	All/organelle/plastid
202	172	35	35	All	Other	All
203	173	35	35	All	Other	All
204	174	35	35	All	Other	All
205	175	35	35	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
206	176	34	34	All	Other	All
207	177	34	34	All	Other	All
208	178	33	33	All	Other	All
209	179	33	33	All/organelle/plastid	Other	All/organelle/plastid
210	180	32	32	All	Other	All
211	181	32	32	All	Other	All
212	182	32	32	All	Other	All
213	183	31	31	All	Other	All
214	184	31	31	All	Other	All
215	185	31	31	All	Other	All
216	186	30	30	All/organelle/plastid	Other	All/organelle/plastid
217	187	30	30	All	Other	All
218	188	30	30	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Ale
219	189	30	30	All	Other	All
220	190	30	30	All	Other	All
221	191	29	29	All	Other	All
222	192	29	29	All	Other	All
223	193	29	29	All	Other	All
224	194	29	29	All	Other	All
225	195	28	28	All	Other	All
226	196	28	28	All	Other	All
227	197	28	28	All	Other	All
228	198	28	28	All	Other	All
229	199	28	28	All	Other	All
230	200	27	27	All	Other	All
231	201	27	27	All	Other	All
232	202	27	27	All	Other	All
233	203	27	27	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator	Other	All/repeat/mobile_element/Class_II/Subclass_1/TIR/MuDR_Mutator
234	204	27	27	All	Other	All
235	205	26	26	All	Other	All
236	206	26	26	All/organelle/plastid	Other	All/organelle/plastid
237	207	26	26	All	Other	All
238	208	26	26	All	Other	All
239	209	25	25	All	Other	All
240	210	25	25	All	Other	All
241	211	25	25	All	Other	All
242	212	25	25	All	Other	All
243	1	25	25	All/organelle/plastid	Other	All/organelle/plastid
244	213	24	24	All/organelle/plastid	Other	All/organelle/plastid
245	214	24	24	All	Other	All
246	215	24	24	All/organelle/plastid	Other	All/organelle/plastid
247	216	24	24	All	Other	All
248	217	23	23	All	Other	All
249	218	23	23	All	Other	All
250	219	23	23	All	Other	All
251	220	23	23	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
252	221	23	23	All	Other	All
253	222	22	22	All	Other	All
254	223	22	22	All	Other	All
255	224	22	22	All	Other	All
256	225	22	22	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela	Other	All/repeat/mobile_element/Class_I/LTR/Ty1_copia/Angela
257	226	22	22	All	Other	All
258	227	22	22	All	Other	All
259	228	22	22	All	Other	All
260	229	21	21	All	Other	All
261	230	21	21	All	Other	All
262	231	21	21	All	Other	All
263	232	21	21	All	Other	All
264	233	20	20	All	Other	All
265	234	20	20	All	Other	All
266	235	20	20	All	Other	All
267	236	20	20	All/organelle/plastid	Other	All/organelle/plastid
268	237	20	20	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	Other	All/repeat/mobile_element/Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila
269	238	20	20	All	Other	All
