sample geneA chrA posA ortA featureA geneB chrB posB ortB featureB sv_ort readsA readsB matchA matchB repeatA repeatB coverageA coverageB ratioA ratioB qposA qposB total_readsA total_readsB contig type score rating medal functional effect frame sv_refseqA sv_refseqA_codon sv_refseqA_exon sv_refseqA_anchor_type sv_refseqA_coding_base_number sv_refseqA_last_coding_base_number sv_refseqA_AA_index sv_refseqA_contig_index sv_refseqB sv_refseqB_codon sv_refseqB_exon sv_refseqB_anchor_type sv_refseqB_coding_base_number sv_refseqB_last_coding_base_number sv_refseqB_AA_index sv_refseqB_contig_index sv_AA sv_desc sv_processing_exception sv_general_info sv_interstitial_AA sv_frame_index test TCF3 chr19 1619111 - coding PBX1 chr1 164792494 + coding > 62 78 98 93 0.000 0.000 1145 1756 0.380 0.770 98 97 399 227 CCTCGCAGGCAGCACCAGCCTCATGCACAACCACGCGGCCCTCCCCAGCCAGCCAGGCACCCTCCCTGACCTGTCTCGGCCTCCCGACTCCTACAGTGTTTTGAGTATCCGAGGAGCCCAGGAGGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGACAACATGCTGTTAGCGGAAGGCGTGGCGGGGG CTX 5802.00 HQ 4 Fusion 1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1 NM_001136139,NM_001351778,NM_001351779,NM_003200,NM_001136139,NM_001351778,NM_001351779,NM_003200,NM_001136139,NM_001351778,NM_001351779,NM_003200,NM_001136139,NM_001351778,NM_001351779,NM_003200,NM_001136139,NM_001351778,NM_001351779,NM_003200 484,483,484,484,484,483,484,484,484,483,484,484,484,483,484,484,484,483,484,484 15,16,16,16,15,16,16,16,15,16,16,16,15,16,16,16,15,16,16,16 perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect,perfect 1450,1447,1450,1450,1450,1447,1450,1450,1450,1447,1450,1450,1450,1447,1450,1450,1450,1447,1450,1450 31,31,31,31,31,31,31,31,31,31,31,31,31,31,31,31,31,31,31,31 96,96,96,96,96,96,96,96,96,96,96,96,96,96,96,96,96,96,96,96 NM_001204961,NM_001204961,NM_001204961,NM_001204961,NM_001204963,NM_001204963,NM_001204963,NM_001204963,NM_001353130,NM_001353130,NM_001353130,NM_001353130,NM_001353131,NM_001353131,NM_001353131,NM_001353131,NM_002585,NM_002585,NM_002585,NM_002585 89,89,89,89,89,89,89,89,6,6,6,6,89,89,89,89,89,89,89,89 3,3,3,3,3,3,3,3,2,2,2,2,3,3,3,3,3,3,3,3 tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple,tuple 266,266,266,266,266,266,266,266,17,17,17,17,266,266,266,266,266,266,266,266 1044,1044,1044,1044,1263,1263,1263,1263,1044,1044,1044,1044,1044,1044,1044,1044,1293,1293,1293,1293 32,32,32,32,32,32,32,32,32,32,32,32,32,32,32,32,32,32,32,32 97,97,97,97,97,97,97,97,97,97,97,97,97,97,97,97,97,97,97,97 LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG,LAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAG TCF3:NM_001136139[1,15]-PBX1:NM_001204961[3,8];TCF3:NM_001351778[1,16]-PBX1:NM_001204961[3,8];TCF3:NM_001351779[1,16]-PBX1:NM_001204961[3,8];TCF3:NM_003200[1,16]-PBX1:NM_001204961[3,8];TCF3:NM_001136139[1,15]-PBX1:NM_001204963[3,9];TCF3:NM_001351778[1,16]-PBX1:NM_001204963[3,9];TCF3:NM_001351779[1,16]-PBX1:NM_001204963[3,9];TCF3:NM_003200[1,16]-PBX1:NM_001204963[3,9];TCF3:NM_001136139[1,15]-PBX1:NM_001353130[2,8];TCF3:NM_001351778[1,16]-PBX1:NM_001353130[2,8];TCF3:NM_001351779[1,16]-PBX1:NM_001353130[2,8];TCF3:NM_003200[1,16]-PBX1:NM_001353130[2,8];TCF3:NM_001136139[1,15]-PBX1:NM_001353131[3,8];TCF3:NM_001351778[1,16]-PBX1:NM_001353131[3,8];TCF3:NM_001351779[1,16]-PBX1:NM_001353131[3,8];TCF3:NM_003200[1,16]-PBX1:NM_001353131[3,8];TCF3:NM_001136139[1,15]-PBX1:NM_002585[3,9];TCF3:NM_001351778[1,16]-PBX1:NM_002585[3,9];TCF3:NM_001351779[1,16]-PBX1:NM_002585[3,9];TCF3:NM_003200[1,16]-PBX1:NM_002585[3,9] geneB_transcripts=NM_001204961,NM_001204963,NM_001353130,NM_001353131,NM_002585 ,,,,,,,,,,,,,,,,,,, 1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1