README.md
pyproject.toml
setup.py
src/RNA.cpp
src/depthFirst.cpp
src/depthFirst_CASHING.cpp
src/depthFirst_IDSTACK.cpp
src/filter.cpp
src/filter_SCHEME.cpp
src/main.cpp
src/string_assembly/__init__.py
src/string_assembly/helpers.py
src/string_assembly.egg-info/PKG-INFO
src/string_assembly.egg-info/SOURCES.txt
src/string_assembly.egg-info/dependency_links.txt
src/string_assembly.egg-info/not-zip-safe
src/string_assembly.egg-info/requires.txt
src/string_assembly.egg-info/top_level.txt
tests/test.py