#syntax=docker/dockerfile:1.3
FROM mambaorg/micromamba:0.15.2@sha256:e74f9ba39e549027dd2fb376afbf3f4f5f603747d684487ab2a26445f36ebadd

ENV FACET_HOME /home/facet

# cache anything in /opt/conda/pkgs so we can build faster locally,
# but do not include them in the final build
RUN --mount=type=cache,id=conda-static-env,target=/opt/conda/pkgs,uid=1000,gid=1000 \
  # we only need the mamba environment.yml for install,
  # so we can mount it rather than copy it into the image
  --mount=type=bind,source=./pipelines/static-env/environment.yml,target=/tmp/environment.yml \
  micromamba install -y -n base -f /tmp/environment.yml

WORKDIR $FACET_HOME

## custom R functions for this step of pipeline
COPY ./pipelines/static-env/R/ ./R/
COPY ./R/ ./R/functions/

RUN ls -lR ./R/ \
  && chmod +x ./R/*.r

#COPY ./pipelines/iccat/py/ ./py/
#COPY ./tools/dagster/facet_shared/ ./facet_shared/

#CMD ["dagster", "api", "grpc", "-h", "0.0.0.0", "-p", "4000", "-f", "/home/facet/py/iccat.py"]
